RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 RASEFQ8IZ41 740 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 LRRC47Q8N1G4 583 aaKnown RBP26.23■■□□□ 1.79
LRRK1-208ENST00000532029 MKL1Q969V6 931 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 ZSCAN10Q96SZ4 725 aaPredicted RBP26.23■■□□□ 1.79
LRRK1-208ENST00000532029 RNF186Q9NXI6 227 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 SYNPO2Q9UMS6 1093 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 LOC285556D6RIA3 1793 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 TAF1CQ15572 869 aaPredicted RBP26.22■■□□□ 1.79
LRRK1-208ENST00000532029 CYB5R4Q7L1T6 521 aa26.22■■□□□ 1.79
LRRK1-208ENST00000532029 MB21D2Q8IYB1 491 aaPredicted RBP26.22■■□□□ 1.79
LRRK1-208ENST00000532029 LPAR1Q92633 364 aa26.22■■□□□ 1.79
LRRK1-208ENST00000532029 KCNB2Q92953 911 aa26.22■■□□□ 1.79
LRRK1-208ENST00000532029 TTC14Q96N46 770 aa26.22■■□□□ 1.79
LRRK1-208ENST00000532029 SLC45A1Q9Y2W3 748 aa26.22■■□□□ 1.79
LRRK1-208ENST00000532029 CA12O43570 354 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 TRPA1O75762 1119 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 DGKHQ86XP1 1220 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 NEK1Q96PY6 1258 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 SAGE1Q9NXZ1 904 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 SNX14Q9Y5W7 946 aa26.21■■□□□ 1.79
LRRK1-208ENST00000532029 TNKSO95271 1327 aa26.2■■□□□ 1.79
LRRK1-208ENST00000532029 ERICH2A1L162 156 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 TOP1P11387 765 aaKnown RBP26.2■■□□□ 1.78
LRRK1-208ENST00000532029 VCAM1P19320 739 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 OSBPP22059 807 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 NOVP48745 357 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 SART3Q15020 963 aaKnown RBP26.2■■□□□ 1.78
LRRK1-208ENST00000532029 SPICE1Q8N0Z3 855 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 PNMA3Q9UL41 463 aa26.2■■□□□ 1.78
LRRK1-208ENST00000532029 F5H6K3 240 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 SEC24BO95487 1268 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 MCM5P33992 734 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 KLRC3Q07444 240 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 PARK7Q99497 189 aaKnown RBP26.19■■□□□ 1.78
LRRK1-208ENST00000532029 TMEM47Q9BQJ4 181 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 ZFYVE28Q9HCC9 887 aa26.19■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L15C9J2P7 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L13C9JLJ4 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L11C9JVI0 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L18D6R9N7 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L22D6RA61 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L17D6RBQ6 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L19D6RCP7 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L20D6RJB6 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 IFIT3O14879 490 aaKnown RBP26.18■■□□□ 1.78
LRRK1-208ENST00000532029 WDR46O15213 610 aaKnown RBP26.18■■□□□ 1.78
LRRK1-208ENST00000532029 HOXA7P31268 230 aaPredicted RBP26.18■■□□□ 1.78
LRRK1-208ENST00000532029 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
LRRK1-208ENST00000532029 USP17L24Q0WX57 530 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 RCSD1Q6JBY9 416 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 CHST3Q7LGC8 479 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 GMCL1P1Q8NEA9 526 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 RPAP3Q9H6T3 665 aaPredicted RBP26.18■■□□□ 1.78
LRRK1-208ENST00000532029 MYH4Q9Y623 1939 aa26.18■■□□□ 1.78
LRRK1-208ENST00000532029 PRC1O43663 620 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 NDUFB10O96000 172 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 ADCK5Q3MIX3 580 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 KIAA1755Q5JYT7 1200 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 SLFN13Q68D06 897 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 ENAHQ8N8S7 591 aaPredicted RBP26.17■■□□□ 1.78
LRRK1-208ENST00000532029 JAKMIP1Q96N16 626 aaKnown RBP26.17■■□□□ 1.78
LRRK1-208ENST00000532029 TANGO6Q9C0B7 1094 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 KAT14Q9H8E8 782 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 PCNTO95613 3336 aa26.17■■□□□ 1.78
LRRK1-208ENST00000532029 TBC1D8O95759 1140 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 HMGB1P09429 215 aaKnown RBP26.16■■□□□ 1.78
LRRK1-208ENST00000532029 PSMA5P28066 241 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 ANTXR2P58335 489 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 CRHR2Q13324 411 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 IFIT1BQ5T764 474 aaKnown RBP26.16■■□□□ 1.78
LRRK1-208ENST00000532029 ANKS1AQ92625 1134 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 MTA3Q9BTC8 594 aa26.16■■□□□ 1.78
LRRK1-208ENST00000532029 CYP2C8P10632 490 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 WTAPQ15007 396 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 TMEM67Q5HYA8 995 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 CATSPERGQ6ZRH7 1159 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 SMCR8Q8TEV9 937 aaPredicted RBP26.15■■□□□ 1.78
LRRK1-208ENST00000532029 CFHR5Q9BXR6 569 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 ASCC2Q9H1I8 757 aaPredicted RBP26.15■■□□□ 1.78
LRRK1-208ENST00000532029 ISY1Q9ULR0 285 aaKnown RBP26.15■■□□□ 1.78
LRRK1-208ENST00000532029 MTMR7Q9Y216 660 aa26.15■■□□□ 1.78
LRRK1-208ENST00000532029 SEC23AQ15436 765 aa26.14■■□□□ 1.78
LRRK1-208ENST00000532029 FAM83BQ5T0W9 1011 aa26.14■■□□□ 1.78
LRRK1-208ENST00000532029 BLOC1S2Q6QNY1 142 aa26.14■■□□□ 1.78
LRRK1-208ENST00000532029 DHX32Q7L7V1 743 aaKnown RBP26.14■■□□□ 1.78
LRRK1-208ENST00000532029 TMEM87BQ96K49 555 aa26.14■■□□□ 1.78
LRRK1-208ENST00000532029 FOXN1O15353 648 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 SLC1A4P43007 532 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 PNMA1Q8ND90 353 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 GMCL1Q96IK5 515 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 NUP88Q99567 741 aaPredicted RBP26.13■■□□□ 1.77
LRRK1-208ENST00000532029 TSKSQ9UJT2 592 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 WDR19Q8NEZ3 1342 aa26.13■■□□□ 1.77
LRRK1-208ENST00000532029 BMP3P12645 472 aa26.12■■□□□ 1.77
LRRK1-208ENST00000532029 ANAPC15P60006 121 aa26.12■■□□□ 1.77
LRRK1-208ENST00000532029 DCAF4Q8WV16 495 aa26.12■■□□□ 1.77
LRRK1-208ENST00000532029 CHMP4CQ96CF2 233 aa26.12■■□□□ 1.77
LRRK1-208ENST00000532029 UPF2Q9HAU5 1272 aaKnown RBP26.12■■□□□ 1.77
LRRK1-208ENST00000532029 TLR2O60603 784 aa26.11■■□□□ 1.77
LRRK1-208ENST00000532029 FLOT1O75955 427 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms