RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
TRIM53AP-201ENST00000532014 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
TRIM53AP-201ENST00000532014 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
TRIM53AP-201ENST00000532014 SH2B2O14492 632 aaPredicted RBP10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 MCCP23508 829 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 VEGFBP49765 207 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 NT5C2P49902 561 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 TRDNQ13061 729 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 KRT32Q14532 448 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 DHX32Q7L7V1 743 aaKnown RBP10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 LRRC47Q8N1G4 583 aaKnown RBP10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 DNAJC5GQ8N7S2 189 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 CAPNS2Q96L46 248 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 PTPN18Q99952 460 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 TM6SF1Q9BZW5 370 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 EMILIN3Q9NT22 766 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
TRIM53AP-201ENST00000532014 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 EIF5BO60841 1220 aaKnown RBP10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 MCM5P33992 734 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 HMGCS2P54868 508 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 TOB2Q14106 344 aaPredicted RBP10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 TREML2Q5T2D2 321 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 DGKHQ86XP1 1220 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 BRI3BPQ8WY22 251 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 TTC14Q96N46 770 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 AGXT2Q9BYV1 514 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 KIAA1683Q9H0B3 1180 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 WDR19Q8NEZ3 1342 aa10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 COL11A1P12107 1806 aaPredicted RBP10.92□□□□□ -0.66
TRIM53AP-201ENST00000532014 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 CXCL11O14625 94 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 GRM1Q13255 1194 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 GPAT2Q6NUI2 795 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 FBXL16Q8N461 479 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 C12orf42Q96LP6 360 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
TRIM53AP-201ENST00000532014 F5H6K3 240 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 NDUFB10O96000 172 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 HMGB1P09429 215 aaKnown RBP10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 VCAM1P19320 739 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 LIFRP42702 1097 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 KLRC3Q07444 240 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 TROAPQ12815 778 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 Q6ZUG5 572 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 SGMS1Q86VZ5 419 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 GMCL1P1Q8NEA9 526 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 UBAC1Q9BSL1 405 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 MTA3Q9BTC8 594 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 ARHGEF10LQ9HCE6 1279 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 BRPF3Q9ULD4 1205 aa10.9□□□□□ -0.66
TRIM53AP-201ENST00000532014 SMCHD1A6NHR9 2005 aa10.9□□□□□ -0.67
TRIM53AP-201ENST00000532014 CCL15-CCL14A0A0B4J2E2 113 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 BTBD19C9JJ37 291 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 CD2BP2O95400 341 aaKnown RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 SNHG28P0DPA3 235 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 TOP1P11387 765 aaKnown RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 PSMA5P28066 241 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 GTF2A2P52657 109 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 KIF23Q02241 960 aaPredicted RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 NOGQ13253 232 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 WTAPQ15007 396 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 CCL15Q16663 113 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 FAM43AQ8N2R8 423 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 MYL10Q9BUA6 226 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 CYP46A1Q9Y6A2 500 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 BAZ2BQ9UIF8 2168 aaKnown RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 PDHBP11177 359 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 TM4SF4P48230 202 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
TRIM53AP-201ENST00000532014 BRF1Q92994 677 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms