RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 TAS1R3Q7RTX0 852 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 APOBEC3FQ8IUX4 373 aaKnown RBP8.8□□□□□ -1
TRIM53CP-201ENST00000531490 ERO1AQ96HE7 468 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 ZNF333Q96JL9 665 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 PLA2G12BQ9BX93 195 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 JAG2Q9Y219 1238 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 PTCH2Q9Y6C5 1203 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 MED23Q9ULK4 1368 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 SPEF2Q9C093 1822 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 CDC14CA4D256 554 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 GRM8O00222 908 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
TRIM53CP-201ENST00000531490 SP3Q02447 781 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 LMBR1LQ6UX01 489 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 CERS5Q8N5B7 392 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 COA1Q9GZY4 146 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 USP44Q9H0E7 712 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 BSDC1Q9NW68 430 aaPredicted RBP8.79□□□□□ -1
TRIM53CP-201ENST00000531490 C9orf78Q9NZ63 289 aaPredicted RBP8.79□□□□□ -1
TRIM53CP-201ENST00000531490 TNNQ9UQP3 1299 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 DYRK1BQ9Y463 629 aa8.79□□□□□ -1
TRIM53CP-201ENST00000531490 ATP9BO43861 1147 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 USP2O75604 605 aaPredicted RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 ALDH1L1O75891 902 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 ZBTB48P10074 688 aaPredicted RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 INHBEP58166 350 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 DLGAP5Q15398 846 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 TLR1Q15399 786 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 SLC4A8Q2Y0W8 1093 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 SV2AQ7L0J3 742 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 SH3TC2Q8TF17 1288 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 SUCLG2Q96I99 432 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 PRMT6Q96LA8 375 aaPredicted RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 CDC5LQ99459 802 aaKnown RBP8.78□□□□□ -1
TRIM53CP-201ENST00000531490 ELP3Q9H9T3 547 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 VEZTQ9HBM0 779 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 PTPRCP08575 1304 aa8.78□□□□□ -1
TRIM53CP-201ENST00000531490 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 CT47B1P0C2W7 299 aaPredicted RBP8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 PHKA2P46019 1235 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 KRT76Q01546 638 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 MAP3K11Q16584 847 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 SLC9C1Q4G0N8 1177 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 BRI3BPQ8WY22 251 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 ARHGAP39Q9C0H5 1083 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 SERTAD1Q9UHV2 236 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZNF804BA4D1E1 1349 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 MYO3BQ8WXR4 1341 aa8.77□□□□□ -1.01
TRIM53CP-201ENST00000531490 DLL1O00548 723 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 RASA3Q14644 834 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 CFAP100Q494V2 611 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 C4orf17Q53FE4 359 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 OPTNQ96CV9 577 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 UTYO14607 1347 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 COL6A3P12111 3177 aa8.76□□□□□ -1.01
TRIM53CP-201ENST00000531490 TAF5LO75529 589 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 IREB2P48200 963 aaKnown RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 SMTNP53814 917 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 IFIT5Q13325 482 aaKnown RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 DBN1Q16643 649 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 SUPT20HL1Q3ZLR7 823 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 RIPOR1Q6ZS17 1223 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 TRIM22Q8IYM9 498 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 ANKRD44Q8N8A2 993 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 RHBDD1Q8TEB9 315 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 FRAT1Q92837 279 aaPredicted RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 COL25A1Q9BXS0 654 aaPredicted RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 CD209Q9NNX6 404 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 TFIP11Q9UBB9 837 aaKnown RBP8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
TRIM53CP-201ENST00000531490 IRS2Q9Y4H2 1338 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 CCL15-CCL14A0A0B4J2E2 113 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 ANKRD18BA2A2Z9 1011 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 IGHMBP2P38935 993 aaKnown RBP8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 KCNJ4P48050 445 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 CHRNDQ07001 517 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 MTFR1Q15390 333 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 TAF1CQ15572 869 aaPredicted RBP8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 CCL15Q16663 113 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 RNFT1Q5M7Z0 435 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 KLHDC4Q8TBB5 520 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms