RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PTPREP23469 700 aa26.75■■□□□ 1.87
TRAPPC4-210ENST00000531290 CCL14Q16627 93 aa26.75■■□□□ 1.87
TRAPPC4-210ENST00000531290 CTR9Q6PD62 1173 aa26.75■■□□□ 1.87
TRAPPC4-210ENST00000531290 C16orf86Q6ZW13 317 aa26.75■■□□□ 1.87
TRAPPC4-210ENST00000531290 TMX2Q9Y320 296 aa26.75■■□□□ 1.87
TRAPPC4-210ENST00000531290 SMIM22K7EJ46 135 aa26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 CACNB2Q08289 660 aaPredicted RBP26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 SIAH1Q8IUQ4 282 aa26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 DIS3LQ8TF46 1054 aaKnown RBP26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 YTHDC1Q96MU7 727 aaKnown RBP26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 STRBPQ96SI9 672 aaKnown RBP26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 NBPF3Q9H094 633 aa26.74■■□□□ 1.87
TRAPPC4-210ENST00000531290 ATP2B2Q01814 1243 aa26.73■■□□□ 1.87
TRAPPC4-210ENST00000531290 MFSD14CQ5VZR4 134 aa26.73■■□□□ 1.87
TRAPPC4-210ENST00000531290 TSHZ3Q63HK5 1081 aa26.73■■□□□ 1.87
TRAPPC4-210ENST00000531290 ARPP21Q9UBL0 812 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC4-210ENST00000531290 OGDHLQ9ULD0 1010 aa26.73■■□□□ 1.87
TRAPPC4-210ENST00000531290 RNF113AO15541 343 aaKnown RBP26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 ZFYP08048 801 aaPredicted RBP26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 KIAA1755Q5JYT7 1200 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 CLEC10AQ8IUN9 316 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 SPICE1Q8N0Z3 855 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 APPBP2Q92624 585 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 VCPKMTQ9H867 229 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 KANSL2Q9H9L4 492 aa26.72■■□□□ 1.87
TRAPPC4-210ENST00000531290 FLOT1O75955 427 aa26.71■■□□□ 1.87
TRAPPC4-210ENST00000531290 LRRFIP1Q32MZ4 808 aaKnown RBP26.71■■□□□ 1.87
TRAPPC4-210ENST00000531290 MB21D1Q8N884 522 aa26.71■■□□□ 1.87
TRAPPC4-210ENST00000531290 PCDHB15Q9Y5E8 787 aa26.71■■□□□ 1.87
TRAPPC4-210ENST00000531290 DSG3P32926 999 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 FXR1P51114 621 aaKnown RBP eCLIP26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 GRB14Q14449 540 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 GIMAP6Q6P9H5 292 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 OSBP2Q969R2 916 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 MOV10L1Q9BXT6 1211 aaKnown RBP26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 SPATC1LQ9H0A9 340 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 C11orf49Q9H6J7 331 aa26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 DDX60LQ5H9U9 1706 aaKnown RBP26.7■■□□□ 1.86
TRAPPC4-210ENST00000531290 ERC2O15083 957 aa26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 HOXC6P09630 235 aa26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 EEF2P13639 858 aaKnown RBP26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 CCND3P30281 292 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 SBK1Q52WX2 424 aa26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 SAMD1Q6SPF0 538 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 DPP9Q86TI2 863 aa26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 MKNK2Q9HBH9 465 aa26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 RBM27Q9P2N5 1060 aaKnown RBP26.69■■□□□ 1.86
TRAPPC4-210ENST00000531290 DOCK3Q8IZD9 2030 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 NAV1Q8NEY1 1877 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 GSG1L2A8MUP6 293 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 MINDY4BA8MYZ0 360 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 WDR46O15213 610 aaKnown RBP26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 STRNO43815 780 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 PLS1Q14651 629 aa26.68■■□□□ 1.86
TRAPPC4-210ENST00000531290 TTC41PQ6P2S7 1318 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 APPP05067 770 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 GNAT2P19087 354 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 SHCBP1Q8NEM2 672 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 GOPCQ9HD26 462 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 FLRT1Q9NZU1 646 aa26.67■■□□□ 1.86
TRAPPC4-210ENST00000531290 GPAA1O43292 621 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 RAD21O60216 631 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 ERCC3P19447 782 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 MNX1P50219 401 aaPredicted RBP26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 RRP1P56182 461 aaKnown RBP26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 LHX8Q68G74 356 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 STK11IPQ8N1F8 1099 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 ATG4CQ96DT6 458 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 MROH8Q9H579 483 aa26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 ZBTB47Q9UFB7 747 aaPredicted RBP26.66■■□□□ 1.86
TRAPPC4-210ENST00000531290 ADORA2AP29274 412 aa26.65■■□□□ 1.86
TRAPPC4-210ENST00000531290 TDO2P48775 406 aa26.65■■□□□ 1.86
TRAPPC4-210ENST00000531290 NCAPG2Q86XI2 1143 aa26.65■■□□□ 1.86
TRAPPC4-210ENST00000531290 NPLOC4Q8TAT6 608 aa26.65■■□□□ 1.86
TRAPPC4-210ENST00000531290 CNGA1P29973 690 aa26.64■■□□□ 1.86
TRAPPC4-210ENST00000531290 C7orf61Q8IZ16 206 aa26.64■■□□□ 1.86
TRAPPC4-210ENST00000531290 ZNF287Q9HBT7 754 aa26.64■■□□□ 1.86
TRAPPC4-210ENST00000531290 SLC5A4Q9NY91 659 aa26.64■■□□□ 1.86
TRAPPC4-210ENST00000531290 PATL2C9JE40 543 aaKnown RBP26.63■■□□□ 1.85
TRAPPC4-210ENST00000531290 CYP2C19P33261 490 aa26.63■■□□□ 1.85
TRAPPC4-210ENST00000531290 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.63■■□□□ 1.85
TRAPPC4-210ENST00000531290 CEP290O15078 2479 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 M0R2C6 588 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 MSCO60682 206 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 RASA1P20936 1047 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 ZNF444Q8N0Y2 327 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 PI4K2BQ8TCG2 481 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 OTUD7AQ8TE49 926 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 FSD1Q9BTV5 496 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 NACAP1Q9BZK3 213 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 PRO3102Q9H379 93 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 PLXNB2O15031 1838 aa26.62■■□□□ 1.85
TRAPPC4-210ENST00000531290 SLC25A27O95847 323 aa26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 TMEM132BQ14DG7 1078 aa26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 ABRAQ8N0Z2 381 aa26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 FBXO28Q9NVF7 368 aa26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 STAP2Q9UGK3 403 aa26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 DDX20Q9UHI6 824 aaKnown RBP26.61■■□□□ 1.85
TRAPPC4-210ENST00000531290 FCER1AP12319 257 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 MX1P20591 662 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms