RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SESN3P58005 492 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ABCF3Q9NUQ8 709 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 HECW1Q76N89 1606 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 SLC4A1P02730 911 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 FOXD4Q12950 439 aaPredicted RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ELF2Q15723 593 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 FAM47AQ5JRC9 791 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 MIER3Q7Z3K6 550 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 CCDC68Q9H2F9 335 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ARAP1Q96P48 1450 aa16.14■□□□□ 0.18
LRRK1-207ENST00000531270 COG7P83436 770 aa16.14■□□□□ 0.18
LRRK1-207ENST00000531270 XAB2Q9HCS7 855 aaKnown RBP16.14■□□□□ 0.18
LRRK1-207ENST00000531270 IGBP1P78318 339 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 MTX1Q13505 466 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 CFAP221Q4G0U5 840 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 MYLK4Q86YV6 388 aaPredicted RBP16.14■□□□□ 0.17
LRRK1-207ENST00000531270 RYBPQ8N488 228 aaPredicted RBP16.14■□□□□ 0.17
LRRK1-207ENST00000531270 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 ADCY8P40145 1251 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 DBN1Q16643 649 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 UHMK1Q8TAS1 419 aaKnown RBP16.14■□□□□ 0.17
LRRK1-207ENST00000531270 APOL6Q9BWW8 343 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
LRRK1-207ENST00000531270 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 SLC27A2O14975 620 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 KAZNQ674X7 775 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 C17orf53Q8N3J3 647 aaPredicted RBP16.14■□□□□ 0.17
LRRK1-207ENST00000531270 RNF217Q8TC41 542 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
LRRK1-207ENST00000531270 MAST3O60307 1309 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 YWHAEP62258 255 aaKnown RBP16.13■□□□□ 0.17
LRRK1-207ENST00000531270 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 KIF11P52732 1056 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 SLC12A1Q13621 1099 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 OTUD6AQ7L8S5 288 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 MAGED2Q9UNF1 606 aaPredicted RBP16.13■□□□□ 0.17
LRRK1-207ENST00000531270 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.13■□□□□ 0.17
LRRK1-207ENST00000531270 RGS16O15492 202 aaPredicted RBP16.13■□□□□ 0.17
LRRK1-207ENST00000531270 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.17
LRRK1-207ENST00000531270 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 GAS7O60861 476 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 NIM1KQ8IY84 436 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 P3H4Q92791 437 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 GPAA1O43292 621 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 PPFIA2O75334 1257 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 LIG4P49917 911 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 MMEL1Q495T6 779 aa16.13■□□□□ 0.17
LRRK1-207ENST00000531270 HAUS8Q9BT25 410 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 BCAP29Q9UHQ4 241 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 DISP3Q9P2K9 1392 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 RNF40O75150 1001 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 ECE1P42892 770 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 MTMR3Q13615 1198 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 HP1BP3Q5SSJ5 553 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 KIF22Q14807 665 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 CUTAO60888 179 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 S100BP04271 92 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 XPAP23025 273 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 C2CD5Q86YS7 1000 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 SPATA17Q96L03 361 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
LRRK1-207ENST00000531270 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
LRRK1-207ENST00000531270 TNNC2P02585 160 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 PHEXP78562 749 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 DLGAP5Q15398 846 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 SNX21Q969T3 373 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 KDRP35968 1356 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 MAIP1Q8WWC4 291 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 IFIH1Q9BYX4 1025 aaKnown RBP16.11■□□□□ 0.17
LRRK1-207ENST00000531270 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
LRRK1-207ENST00000531270 MAD1L1Q9Y6D9 718 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 POSTNQ15063 836 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 FPGT-TNNI3KV9GXZ4 949 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
LRRK1-207ENST00000531270 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms