RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 CCL15Q16663 113 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 ADCK5Q3MIX3 580 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 RALYLQ86SE5 291 aaKnown RBP18.9■□□□□ 0.62
BRK1-201ENST00000530758 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 ZSCAN10Q96SZ4 725 aaPredicted RBP18.9■□□□□ 0.62
BRK1-201ENST00000530758 BEGAINQ9BUH8 593 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 BACH2Q9BYV9 841 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 SLC45A1Q9Y2W3 748 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
BRK1-201ENST00000530758 CA12O43570 354 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 HMGB1P09429 215 aaKnown RBP18.89■□□□□ 0.61
BRK1-201ENST00000530758 ANTXR2P58335 489 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 EXOSC10Q01780 885 aaKnown RBP18.89■□□□□ 0.61
BRK1-201ENST00000530758 SEC23AQ15436 765 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 ANKRD23Q86SG2 305 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 TM6SF1Q9BZW5 370 aa18.89■□□□□ 0.61
BRK1-201ENST00000530758 HOXA7P31268 230 aaPredicted RBP18.88■□□□□ 0.61
BRK1-201ENST00000530758 MCM5P33992 734 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 HMGCS2P54868 508 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 IFNL1Q8IU54 200 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 LPAR1Q92633 364 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 VCPKMTQ9H867 229 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 RNF186Q9NXI6 227 aa18.88■□□□□ 0.61
BRK1-201ENST00000530758 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 IGF2BP3O00425 579 aaKnown RBP eCLIP18.87■□□□□ 0.617e-10■■■□□ 16.4
BRK1-201ENST00000530758 TOP1P11387 765 aaKnown RBP18.87■□□□□ 0.61
BRK1-201ENST00000530758 PSMA5P28066 241 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 COL9A3Q14050 684 aaPredicted RBP18.87■□□□□ 0.61
BRK1-201ENST00000530758 DHX32Q7L7V1 743 aaKnown RBP18.87■□□□□ 0.61
BRK1-201ENST00000530758 FBXL16Q8N461 479 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
BRK1-201ENST00000530758 TMEM87BQ96K49 555 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 TMEM47Q9BQJ4 181 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 CFHR5Q9BXR6 569 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 STX8Q9UNK0 236 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 AGTPBP1Q9UPW5 1226 aa18.87■□□□□ 0.61
BRK1-201ENST00000530758 TNKSO95271 1327 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 F5H6K3 240 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 ALDH1A1P00352 501 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 KLRC3Q07444 240 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 KIAA1755Q5JYT7 1200 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 FEZ1Q99689 392 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 UBAC1Q9BSL1 405 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 GOPCQ9HD26 462 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
BRK1-201ENST00000530758 RLFQ13129 1914 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 PRC1O43663 620 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 TRPA1O75762 1119 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 LIFRP42702 1097 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 RBM25P49756 843 aaKnown RBP18.85■□□□□ 0.61
BRK1-201ENST00000530758 ATP2B2Q01814 1243 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 DGKZQ13574 1117 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
BRK1-201ENST00000530758 FAM43AQ8N2R8 423 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 TMTC2Q8N394 836 aa18.85■□□□□ 0.61
BRK1-201ENST00000530758 PARP14Q460N5 1801 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
BRK1-201ENST00000530758 WDR46O15213 610 aaKnown RBP18.84■□□□□ 0.61
BRK1-201ENST00000530758 VCAM1P19320 739 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 PABPC4Q13310 644 aaKnown RBP eCLIP18.84■□□□□ 0.612e-9■■■□□ 17.6
BRK1-201ENST00000530758 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 GADL1Q6ZQY3 521 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
BRK1-201ENST00000530758 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
BRK1-201ENST00000530758 ERICH2A1L162 156 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 NDUFB10O96000 172 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 SNHG28P0DPA3 235 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 BLOC1S2Q6QNY1 142 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 RUFY3Q7L099 469 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 SGMS1Q86VZ5 419 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 C22orf23Q9BZE7 217 aa18.83■□□□□ 0.6
BRK1-201ENST00000530758 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 PDHXO00330 501 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 SH2B2O14492 632 aaPredicted RBP18.82■□□□□ 0.6
BRK1-201ENST00000530758 CAPN15O75808 1086 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 WTAPQ15007 396 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 ZYXQ15942 572 aaKnown RBP18.82■□□□□ 0.6
BRK1-201ENST00000530758 IFIT1BQ5T764 474 aaKnown RBP18.82■□□□□ 0.6
BRK1-201ENST00000530758 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 LRRC47Q8N1G4 583 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms