RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FAM102BQ5T8I3 360 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 IFNL3Q8IZI9 196 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 CHURC1Q8WUH1 139 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 HAUS7Q99871 368 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-227ENST00000530748 STMN2Q93045 179 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■□□ 17.3
CTNND1-227ENST00000530748 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-227ENST00000530748 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 APBA3O96018 575 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 IRX3P78415 501 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-227ENST00000530748 ME3Q16798 604 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 IPO4Q8TEX9 1081 aaKnown RBP9.39□□□□□ -0.91
CTNND1-227ENST00000530748 STIM2Q9P246 746 aa9.39□□□□□ -0.91
CTNND1-227ENST00000530748 A6NNZ2 444 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 PFKFB2O60825 505 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GAS7O60861 476 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 TUBB8Q3ZCM7 444 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 CFAP221Q4G0U5 840 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 ZWINTO95229 277 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GBP1P32455 592 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MTX1Q13505 466 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MORC3Q14149 939 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GEN1Q17RS7 908 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 FLAD1Q8NFF5 587 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 IWS1Q96ST2 819 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 SLC5A4Q9NY91 659 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GABPAQ06546 454 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 CEP104O60308 925 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 N4BP1O75113 896 aaKnown RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 PAK2Q13177 524 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 TNFAIP1Q13829 316 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GNPTABQ3T906 1256 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 ADALQ6DHV7 355 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 CPXCR1Q8N123 301 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 PANK4Q9NVE7 773 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 MYO1AQ9UBC5 1043 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 PCCAP05165 728 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-227ENST00000530748 RPS6KA1Q15418 735 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 DEPTORQ8TB45 409 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 ASIC3Q9UHC3 531 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
CTNND1-227ENST00000530748 NLRP1Q9C000 1473 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 GOLGA6DP0CG33 693 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 GTF2IP78347 998 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 NSMFQ6X4W1 530 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 GOLGA6AQ9NYA3 693 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PFKFB1P16118 471 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 BTDP43251 543 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 MAGEA1P43355 309 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 NOSTRINQ8IVI9 506 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
CTNND1-227ENST00000530748 TEKT3Q9BXF9 490 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 DDX25Q9UHL0 483 aaKnown RBP9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PCDHB13Q9Y5F0 798 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 CIAO1O76071 339 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 RPS8P62241 208 aaKnown RBP9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PRKG1Q13976 671 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 LGSNQ5TDP6 509 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 KRBA2Q6ZNG9 492 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 CCDC84Q86UT8 332 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-227ENST00000530748 KLHL7Q8IXQ5 586 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PPFIBP2Q8ND30 876 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 SSH3Q8TE77 659 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
CTNND1-227ENST00000530748 RGS12O14924 1447 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms