RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 VCAM1P19320 739 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 SP3Q02447 781 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 SPICE1Q8N0Z3 855 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 MKL1Q969V6 931 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 PARK7Q99497 189 aaKnown RBP10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 P2RX7Q99572 595 aaKnown RBP10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 NEDD4P46934 1319 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 PEX10O60683 326 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 CYP21A2P08686 494 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 BCRP11274 1271 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 PCP11498 1178 aaKnown RBP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 OSBPP22059 807 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 PABPC4Q13310 644 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 CATSPERGQ6ZRH7 1159 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 KIAA1211Q6ZU35 1233 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 CD99L2Q8TCZ2 262 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 RNF41Q9H4P4 317 aaPredicted RBP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 RPAP3Q9H6T3 665 aaPredicted RBP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 SH2D4AQ9H788 454 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 VCPKMTQ9H867 229 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 RBM8AQ9Y5S9 174 aaKnown RBP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
UBASH3B-205ENST00000529998 B4E1Z4 1266 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 F5H6K3 240 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 RAD21O60216 631 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 KDM4AO75164 1064 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 TTLL1O95922 423 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 CTGFP29279 349 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 NOVP48745 357 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 HERVK_113P62684 666 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 IRX3P78415 501 aaPredicted RBP10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 KLRC3Q07444 240 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 LRRC47Q8N1G4 583 aaKnown RBP10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 ANKRD13CQ8N6S4 541 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 SMCR8Q8TEV9 937 aaPredicted RBP10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 LPAR1Q92633 364 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 ARHGAP39Q9C0H5 1083 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 TCP11L1Q9NUJ3 509 aa10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 COL11A1P12107 1806 aaPredicted RBP10.26□□□□□ -0.77
UBASH3B-205ENST00000529998 DOCK3Q8IZD9 2030 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 NDUFB10O96000 172 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 LACTBP83111 547 aaPredicted RBP10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 RCSD1Q6JBY9 416 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 STOX1Q6ZVD7 989 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 ESR2Q92731 530 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 ERO1AQ96HE7 468 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 NUP88Q99567 741 aaPredicted RBP10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 RBPJLQ9UBG7 517 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
UBASH3B-205ENST00000529998 E7EWF7 191 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 SLC27A2O14975 620 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 COG2Q14746 738 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 Q3C1V9 767 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 FAM83BQ5T0W9 1011 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 CREB3L3Q68CJ9 461 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 GMCL1P1Q8NEA9 526 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 TMEM47Q9BQJ4 181 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 KRT23Q9C075 422 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 CNNM2Q9H8M5 875 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 FBXO28Q9NVF7 368 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 A0A0G2JMZ2 1700 aa10.24□□□□□ -0.77
UBASH3B-205ENST00000529998 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 CNMDO75829 334 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 FLOT1O75955 427 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 PSMC4P43686 418 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 COL9A3Q14050 684 aaPredicted RBP10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 FAM110CQ1W6H9 321 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 LBX2Q6XYB7 198 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
UBASH3B-205ENST00000529998 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms