RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 DYMQ7RTS9 669 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 TRIM42Q8IWZ5 723 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 ZNF296Q8WUU4 475 aaPredicted RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 ACBD3Q9H3P7 528 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 BLMP54132 1417 aaPredicted RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 SART1O43290 800 aaKnown RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 GARTP22102 1010 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 TNNI2P48788 182 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 SOX4Q06945 474 aaPredicted RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 PLPPR2Q96GM1 343 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 PCDHGC5Q9Y5F6 944 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 TMPRSS2O15393 492 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 TIAF1O95411 115 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 SLFN14P0C7P3 912 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 GATA4P43694 442 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 ID3Q02535 119 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 ANKRD34AQ69YU3 496 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 LRFN4Q6PJG9 635 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 Q6ZS46 218 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 SPON2Q9BUD6 331 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 UBP1Q9NZI7 540 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 LAMC1P11047 1609 aa7.41□□□□□ -1.22
AMBRA1-209ENST00000529963 NPHP3Q7Z494 1330 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 CRKP46108 304 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 PPM1JQ5JR12 505 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 WIPI1Q5MNZ9 446 aaPredicted RBP7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 C2CD4AQ8NCU7 369 aaPredicted RBP7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 ELMO3Q96BJ8 720 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 FAM105AQ9NUU6 356 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.22
AMBRA1-209ENST00000529963 CCDC144AA2RUR9 1427 aa7.4□□□□□ -1.23
AMBRA1-209ENST00000529963 PRAMEF27A3QJZ7 478 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 FAM221AA4D161 298 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 KIAA0825Q8IV33 1275 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 DZIP1LQ8IYY4 767 aaKnown RBP7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 ARMC10Q8N2F6 343 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 GATAD2BQ8WXI9 593 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 EAF1Q96JC9 268 aaPredicted RBP7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 CEP41Q9BYV8 373 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 DISC1Q9NRI5 854 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 ANKRD30BQ9BXX2 1392 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 PPLO60437 1756 aa7.39□□□□□ -1.23
AMBRA1-209ENST00000529963 CDC42BPGQ6DT37 1551 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 GAS2O43903 313 aaKnown RBP7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 RAB6AP20340 208 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 ASPAP45381 313 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 SGO2Q562F6 1265 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 CDPF1Q6NVV7 123 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 TP53INP1Q96A56 240 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 FAM46AQ96IP4 442 aaKnown RBP7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 TGIF2Q9GZN2 237 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 HIF3AQ9Y2N7 669 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 LRPPRCP42704 1394 aaKnown RBP7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 ADGRF5Q8IZF2 1346 aa7.38□□□□□ -1.23
AMBRA1-209ENST00000529963 GREM1O60565 184 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 CILPO75339 1184 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 BMP3P12645 472 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 PAK2Q13177 524 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 DOC2BQ14184 412 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 TTLL4Q14679 1199 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 STK26Q9P289 416 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 MYOM2P54296 1465 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 TECPR2O15040 1411 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 ATRNO75882 1429 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 GRIN3BO60391 1043 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 BPNT1O95861 308 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 USP11P51784 963 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 KCNQ5Q9NR82 932 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 TPSG1Q9NRR2 321 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 CORINQ9Y5Q5 1042 aa7.37□□□□□ -1.23
AMBRA1-209ENST00000529963 ABCC11Q96J66 1382 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 SPATA31E1Q6ZUB1 1445 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 GFRA2O00451 464 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 NEFMP07197 916 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms