RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ASNSP08243 561 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 MCAMP43121 646 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 EPHB4P54760 987 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 GSTO1P78417 241 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 ATP2B2Q01814 1243 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 MVPQ14764 893 aaKnown RBP4.34□□□□□ -1.71
PTPRC-213ENST00000529828 LPAR1Q92633 364 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 TBC1D2Q9BYX2 928 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 PDLIM7Q9NR12 457 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 BTBD7Q9P203 1132 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 LRP2BPQ9P2M1 347 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 PI4KBQ9UBF8 816 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 HERC5Q9UII4 1024 aaKnown RBP4.34□□□□□ -1.71
PTPRC-213ENST00000529828 FLT1P17948 1338 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 LTBP2Q14767 1821 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 FRMPD3Q5JV73 1810 aa4.34□□□□□ -1.71
PTPRC-213ENST00000529828 TRIM43BA6NCK2 446 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 KBTBD13C9JR72 458 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 SRGAP3O43295 1099 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 LDHCP07864 332 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 PTPREP23469 700 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 ITGB8P26012 769 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 ADCYAP1R1P41586 468 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 DYNLL1P63167 89 aaKnown RBP4.34□□□□□ -1.72
PTPRC-213ENST00000529828 GRIN2CQ14957 1233 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 RAB3GAP1Q15042 981 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 PRAMEF19Q5SWL8 479 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 EFCAB3Q8N7B9 438 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 ACER1Q8TDN7 264 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 TRIM43Q96BQ3 446 aaPredicted RBP4.34□□□□□ -1.72
PTPRC-213ENST00000529828 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.72
PTPRC-213ENST00000529828 NOL10Q9BSC4 688 aaKnown RBP4.34□□□□□ -1.72
PTPRC-213ENST00000529828 COPRSQ9NQ92 184 aa4.34□□□□□ -1.72
PTPRC-213ENST00000529828 PDS5AQ29RF7 1337 aaKnown RBP4.34□□□□□ -1.72
PTPRC-213ENST00000529828 TMEM265A0A087WTH1 108 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 C19orf81C9J6K1 198 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 CYBAP13498 195 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 VCAM1P19320 739 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 TLE2Q04725 743 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 GRB14Q14449 540 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 NAA16Q6N069 864 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L2Q6R6M4 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 SLC39A5Q6ZMH5 540 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 NOB1Q9ULX3 412 aaKnown RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 RABGAP1Q9Y3P9 1069 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 IVNS1ABPQ9Y6Y0 642 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF521Q96K83 1311 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 SLC15A5A6NIM6 579 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 SPDYE16A6NNV3 312 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L15C9J2P7 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L13C9JLJ4 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L11C9JVI0 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L18D6R9N7 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L22D6RA61 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L17D6RBQ6 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L19D6RCP7 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L20D6RJB6 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 TNFRSF10AO00220 468 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 PQBP1O60828 265 aaKnown RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 GLRX3O76003 335 aaKnown RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 ADORA2AP29274 412 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 ARID4AP29374 1257 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 CCNA1P78396 465 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 SMAD3P84022 425 aaKnown RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 USP17L24Q0WX57 530 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 FAM47AQ5JRC9 791 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 TJAP1Q5JTD0 557 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 CATSPERGQ6ZRH7 1159 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 DPP9Q86TI2 863 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 MIGA1Q8NAN2 632 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 GTF3C2Q8WUA4 911 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 LENG1Q96BZ8 264 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 DHX36Q9H2U1 1008 aaKnown RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 RPAP3Q9H6T3 665 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-213ENST00000529828 AKAP2Q9Y2D5 859 aa4.33□□□□□ -1.72
PTPRC-213ENST00000529828 NCOR1O75376 2440 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 ANP32CO43423 234 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 MSCO60682 206 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 BAG3O95817 575 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 HLA-DOAP06340 250 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 DNAJB2P25686 324 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 LRRC41Q15345 812 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 CCDC85BQ15834 202 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 TTC39AQ5SRH9 613 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 ARRDC4Q8NCT1 418 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 SYMPKQ92797 1274 aaKnown RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 CDCA7LQ96GN5 454 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 DBNDD2Q9BQY9 259 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 MOV10L1Q9BXT6 1211 aaKnown RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 PIH1D3Q9NQM4 214 aaKnown RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 PNMA6EA0A0J9YXQ4 647 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 GRXCR1A8MXD5 290 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 E9PSI1 815 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 SEPT4O43236 478 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 COBLO75128 1261 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 MAP4K4O95819 1239 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 PGK1P00558 417 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 CYP2E1P05181 493 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 HOXC6P09630 235 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 ERCC3P19447 782 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms