RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 LARGE2Q8N3Y3 721 aa17.8■□□□□ 0.44
CCDC90B-213ENST00000529611 EHD4Q9H223 541 aa17.8■□□□□ 0.44
CCDC90B-213ENST00000529611 MTMR7Q9Y216 660 aa17.8■□□□□ 0.44
CCDC90B-213ENST00000529611 SIPA1L1O43166 1804 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 IGKV6D-41A0A0C4DH26 115 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 KRT2P35908 639 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 RILPL1Q5EBL4 403 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 MTMR4Q9NYA4 1195 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 PIM2Q9P1W9 311 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 TCP10Q12799 353 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 FMR1NBQ8N0W7 255 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-213ENST00000529611 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 CYTH3O43739 400 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 POLD1P28340 1107 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 JMYQ8N9B5 988 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 DHX36Q9H2U1 1008 aaKnown RBP17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 DNAJC18Q9H819 358 aa17.78■□□□□ 0.44
CCDC90B-213ENST00000529611 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 PSMD14O00487 310 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 RAD17O75943 681 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 NDUFA8P51970 172 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 SH3BP5LQ7L8J4 393 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 TNFRSF25Q93038 417 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
CCDC90B-213ENST00000529611 GREB1LQ9C091 1923 aaPredicted RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 FAM205CA6NFA0 338 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 KINO60870 393 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 CMA1P23946 247 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 EARS2Q5JPH6 523 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 ANP32BQ92688 251 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 GMLQ99445 158 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 LZTS2Q9BRK4 669 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 TDRD3Q9H7E2 651 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.43
CCDC90B-213ENST00000529611 KLRF2D3W0D1 207 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 TYRO3Q06418 890 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 SPZ1Q9BXG8 430 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 PCDHB6Q9Y5E3 794 aa17.76■□□□□ 0.43
CCDC90B-213ENST00000529611 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 SH3GLB2Q9NR46 395 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 PI4KBQ9UBF8 816 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 CTAGE5O15320 804 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 NLRP5P59047 1200 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 SHC4Q6S5L8 630 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 MRVI1Q9Y6F6 885 aa17.75■□□□□ 0.43
CCDC90B-213ENST00000529611 USP17L5A8MUK1 530 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 TTLL1O95922 423 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 PDHBP11177 359 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 PFKFB1P16118 471 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 LRRC47Q8N1G4 583 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 CLIC6Q96NY7 704 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
CCDC90B-213ENST00000529611 SPDYE2BA6NHP3 402 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 FAM196BA6NMK8 535 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 CUTAO60888 179 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 ENTPD3O75355 529 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 SPDYE6P0CI01 402 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 UVSSAQ2YD98 709 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 TYW1BQ6NUM6 668 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 NIM1KQ8IY84 436 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 KRI1Q8N9T8 703 aaKnown RBP17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 ZNRF3Q9ULT6 936 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 FAM237AA0A1B0GTK4 181 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 CALML3P27482 149 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms