RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 KAT14Q9H8E8 782 aa16.33■□□□□ 0.2
BEST1-206ENST00000529265 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
BEST1-206ENST00000529265 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
BEST1-206ENST00000529265 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
BEST1-206ENST00000529265 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
BEST1-206ENST00000529265 CETPP11597 493 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 VEGFBP49765 207 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
BEST1-206ENST00000529265 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
BEST1-206ENST00000529265 CCL15Q16663 113 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 MKL1Q969V6 931 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
BEST1-206ENST00000529265 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
BEST1-206ENST00000529265 AOC2O75106 756 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 SEC23AQ15436 765 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 Q6ZUG5 572 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
BEST1-206ENST00000529265 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
BEST1-206ENST00000529265 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 IGDCC4Q8TDY8 1250 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
BEST1-206ENST00000529265 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
BEST1-206ENST00000529265 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
BEST1-206ENST00000529265 NOVP48745 357 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
BEST1-206ENST00000529265 SREBF2Q12772 1141 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 DGKZQ13574 1117 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 SLFN13Q68D06 897 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 SPICE1Q8N0Z3 855 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 ANKS1AQ92625 1134 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 GPHNQ9NQX3 736 aaPredicted RBP16.3■□□□□ 0.2
BEST1-206ENST00000529265 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
BEST1-206ENST00000529265 F5H6K3 240 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 NEK4P51957 841 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 INHBEP58166 350 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 KLRC3Q07444 240 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
BEST1-206ENST00000529265 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 LPAR1Q92633 364 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 IL17RAQ96F46 866 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
BEST1-206ENST00000529265 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
BEST1-206ENST00000529265 NDUFB10O96000 172 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 LIFRP42702 1097 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 OTUD7BQ6GQQ9 843 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 ZIC5Q96T25 663 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 VCAM1P19320 739 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 MAP2K2P36507 400 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 SLC1A4P43007 532 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 RABEP1Q15276 862 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
BEST1-206ENST00000529265 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 BRF1Q92994 677 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
BEST1-206ENST00000529265 WDR46O15213 610 aaKnown RBP16.27■□□□□ 0.19
BEST1-206ENST00000529265 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.19
BEST1-206ENST00000529265 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 TREML2Q5T2D2 321 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 KIF2CQ99661 725 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 RPAP3Q9H6T3 665 aaPredicted RBP16.27■□□□□ 0.19
BEST1-206ENST00000529265 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.19
BEST1-206ENST00000529265 KLF18A0A0U1RQI7 1052 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
BEST1-206ENST00000529265 BTBD19C9JJ37 291 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 BMP3P12645 472 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 OSBPP22059 807 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
BEST1-206ENST00000529265 MOGSQ13724 837 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 FAM83BQ5T0W9 1011 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
BEST1-206ENST00000529265 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
BEST1-206ENST00000529265 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
BEST1-206ENST00000529265 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms