RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 INPP5BP32019 993 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 PLCD1P51178 756 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GRM1Q13255 1194 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 VARS2Q5ST30 1063 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GIMAP6Q6P9H5 292 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 RASAL3Q86YV0 1011 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 DDX12PQ92771 950 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 WRNIP1Q96S55 665 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 MCM9Q9NXL9 1143 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 SAP30BPQ9UHR5 308 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 CSADQ9Y600 493 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 PAPPA2Q9BXP8 1791 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 MAST2Q6P0Q8 1798 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 USP17L21D6R901 530 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 CTNND1O60716 968 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 FOXK1P85037 733 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 VGLL4Q14135 290 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 MCMDC2Q4G0Z9 681 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 SPRYD7Q5W111 196 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 CTR9Q6PD62 1173 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 IFNL3Q8IZI9 196 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 ZNF687Q8N1G0 1237 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 FAM227BQ96M60 508 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 EHD4Q9H223 541 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 ELP3Q9H9T3 547 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 SERPINB13Q9UIV8 391 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 SNCAIPQ9Y6H5 919 aa7.47□□□□□ -1.21
ATPAF1-209ENST00000529214 A0A0D9SFI3 127 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 HIP1O00291 1037 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 ZBTB48P10074 688 aaPredicted RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 GJA5P36382 358 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 CAP2P40123 477 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 TM4SF4P48230 202 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 INHBEP58166 350 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 MAP2K1Q02750 393 aaPredicted RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 PPATQ06203 517 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 GABPAQ06546 454 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 RRP1BQ14684 758 aaKnown RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 SLC4A8Q2Y0W8 1093 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 SBK1Q52WX2 424 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 C12orf60Q5U649 245 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 TATDN1Q6P1N9 297 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 SKAP1Q86WV1 359 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 ERO1BQ86YB8 467 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 SCYL3Q8IZE3 742 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 CRACR2BQ8N4Y2 399 aaPredicted RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 ANP32BQ92688 251 aaKnown RBP7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 OPTNQ96CV9 577 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 WNK4Q96J92 1243 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 DNAJC18Q9H819 358 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 LIMD1Q9UGP4 676 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 PCNTO95613 3336 aa7.46□□□□□ -1.22
ATPAF1-209ENST00000529214 ANKRD62A6NC57 917 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 FOXP2O15409 715 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 APPP05067 770 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 CYP2D6P10635 497 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 PTPRAP18433 802 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 CWC27Q6UX04 472 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 CCDC129Q6ZRS4 1044 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 TMTC2Q8N394 836 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 TRIM34Q9BYJ4 488 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 WBP1LQ9NX94 342 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 BOLA1Q9Y3E2 137 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 AK9Q5TCS8 1911 aa7.45□□□□□ -1.22
ATPAF1-209ENST00000529214 CYP2D7A0A087X1C5 515 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 MANSC4A6NHS7 340 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 SMIM22K7EJ46 135 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 HSPD1P10809 573 aaKnown RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 CHMLP26374 656 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 SHMT1P34896 483 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 JAG1P78504 1218 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 PPIL2Q13356 520 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 ALX1Q15699 326 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 CERKLQ49MI3 558 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 BMP2KLQ5H9B9 411 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 VPS53Q5VIR6 699 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 ZNF589Q86UQ0 364 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 DYNLL2Q96FJ2 89 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 NACAP1Q9BZK3 213 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 EPB41L4AQ9HCS5 686 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 DIAPH3Q9NSV4 1193 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 GINM1Q9NU53 330 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 ARPP21Q9UBL0 812 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 SWAP70Q9UH65 585 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 PRDM4Q9UKN5 801 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 ZHX2Q9Y6X8 837 aa7.44□□□□□ -1.22
ATPAF1-209ENST00000529214 CCDC171Q6TFL3 1326 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms