RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 ME3Q16798 604 aa9□□□□□ -0.97
C11orf88-203ENST00000529167 C6orf89Q6UWU4 347 aa9□□□□□ -0.97
C11orf88-203ENST00000529167 BZW1Q7L1Q6 419 aaKnown RBP9□□□□□ -0.97
C11orf88-203ENST00000529167 APBB1IPQ7Z5R6 666 aaPredicted RBP9□□□□□ -0.97
C11orf88-203ENST00000529167 CCAR1Q8IX12 1150 aaKnown RBP9□□□□□ -0.97
C11orf88-203ENST00000529167 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
C11orf88-203ENST00000529167 ZFAND2BQ8WV99 257 aa9□□□□□ -0.97
C11orf88-203ENST00000529167 TMEM165Q9HC07 324 aa9□□□□□ -0.97
C11orf88-203ENST00000529167 TPCN1Q9ULQ1 816 aa9□□□□□ -0.97
C11orf88-203ENST00000529167 EPB41L3Q9Y2J2 1087 aaPredicted RBP9□□□□□ -0.97
C11orf88-203ENST00000529167 SRRM3A6NNA2 597 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 SEMA3EO15041 775 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 MGRN1O60291 552 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PDHBP11177 359 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 GGCXP38435 758 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 GNGT1P63211 74 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 ROR2Q01974 943 aaKnown RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 G3BP1Q13283 466 aaKnown RBP eCLIP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 STIM1Q13586 685 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 LAMB3Q13751 1172 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 THEMIS2Q5TEJ8 643 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 EMC10Q5UCC4 262 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 NME9Q86XW9 330 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 LZTS2Q9BRK4 669 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CFAP45Q9UL16 551 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TPX2Q9ULW0 747 aaKnown RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TESPA1A2RU30 521 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 ENO4A6NNW6 628 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PDLIM1O00151 329 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 MYO1BO43795 1136 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PFKFB2O60825 505 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 EPB41P11171 864 aaKnown RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PEX19P40855 299 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 WHAMMP3Q1A5X7 153 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 SLC30A9Q6PML9 568 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 MTHFD1LQ6UB35 978 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 FERMT3Q86UX7 667 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 VSTM4Q8IW00 320 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 KIRREL3Q8IZU9 778 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 EHD4Q9H223 541 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 HSD3B7Q9H2F3 369 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CREBZFQ9NS37 354 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 RTEL1Q9NZ71 1219 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 RCOR1Q9UKL0 485 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 SAMM50Q9Y512 469 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 TIAM2Q8IVF5 1701 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 HMMRO75330 724 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PYGBP11216 843 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 FANCCQ00597 558 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CRELD2Q6UXH1 353 aaPredicted RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CCDC47Q96A33 483 aaKnown RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 EPAS1Q99814 870 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
C11orf88-203ENST00000529167 PUF60Q9UHX1 559 aaKnown RBP8.99□□□□□ -0.97
C11orf88-203ENST00000529167 NDUFAB1O14561 156 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 CBFA2T2O43439 604 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 FERP16591 822 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 PAPOLAP51003 745 aaKnown RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 FAM160A1Q05DH4 1040 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 LINC00116Q8NCU8 138 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 FAM81AQ8TBF8 368 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 ALS2CR12Q96Q35 445 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 RNF181Q9P0P0 153 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 PCDH11XQ9BZA7 1347 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 PCDH11YQ9BZA8 1340 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 TARSL2A2RTX5 802 aaKnown RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 A6NHS1 94 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 GOLGA8KD6RF30 607 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 VEGFAP15692 232 aaPredicted RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 USP4Q13107 963 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 XRCC4Q13426 336 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 AKNAD1Q5T1N1 836 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 NLGN1Q8N2Q7 840 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 NBPF15Q8N660 670 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 SPAG5Q96R06 1193 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 ALDH8A1Q9H2A2 487 aaPredicted RBP8.98□□□□□ -0.97
C11orf88-203ENST00000529167 GOLPH3LQ9H4A5 285 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
C11orf88-203ENST00000529167 CNTNAP1P78357 1384 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 GOLGA6L7A0A1B0GV03 622 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 CTAGE15A4D2H0 777 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 CTAGE8P0CG41 777 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 RESTQ13127 1097 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 CTAGE6Q86UF2 777 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 CTAGE4Q8IX94 777 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 CCDC170Q8IYT3 715 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 TRIM58Q8NG06 486 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 RIN2Q8WYP3 895 aaPredicted RBP8.97□□□□□ -0.97
C11orf88-203ENST00000529167 ABHD8Q96I13 439 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 COL5A3P25940 1745 aaPredicted RBP8.97□□□□□ -0.97
C11orf88-203ENST00000529167 MAP3K19Q56UN5 1328 aa8.97□□□□□ -0.97
C11orf88-203ENST00000529167 RHOXF2BP0C7M4 288 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms