RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 STOX1Q6ZVD7 989 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 MIGA2Q7L4E1 593 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 FASTKD5Q7L8L6 764 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 SAPCD2Q86UD0 394 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 PLCD3Q8N3E9 789 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 ZNF526Q8TF50 670 aaPredicted RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 DYNLL2Q96FJ2 89 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 KIF2CQ99661 725 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 LZTS2Q9BRK4 669 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 GOPCQ9HD26 462 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 SH2B1Q9NRF2 756 aaPredicted RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 TOMM22Q9NS69 142 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 SLC45A1Q9Y2W3 748 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 TLL2Q9Y6L7 1015 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 NID2Q14112 1375 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 TNKSO95271 1327 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 NEDD4P46934 1319 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 CYP2D7A0A087X1C5 515 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 SH2B2O14492 632 aaPredicted RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 IFIT3O14879 490 aaKnown RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 SNHG28P0DPA3 235 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 KIF5BP33176 963 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 ECE1P42892 770 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 APLP1P51693 650 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 NEK4P51957 841 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 GTF2A2P52657 109 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 BACE1P56817 501 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 FGD1P98174 961 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 ICA1Q05084 483 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 PABPC4Q13310 644 aaKnown RBP eCLIP7.28□□□□□ -1.24
MACF1-228ENST00000528611 ADCK5Q3MIX3 580 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 CST9Q5W186 159 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 USP17L2Q6R6M4 530 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 CATIPQ7Z7H3 387 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 ENAHQ8N8S7 591 aaPredicted RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 GTF3C2Q8WUA4 911 aaPredicted RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 SLC10A4Q96EP9 437 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 GMCL1Q96IK5 515 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.28□□□□□ -1.24
MACF1-228ENST00000528611 KAT14Q9H8E8 782 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 IL17RBQ9NRM6 502 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 PDRG1Q9NUG6 133 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 RBM28Q9NW13 759 aaKnown RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
MACF1-228ENST00000528611 AFG3L2Q9Y4W6 797 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
MACF1-228ENST00000528611 TESPA1A2RU30 521 aaPredicted RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 MANSC4A6NHS7 340 aaPredicted RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 CCDC69A6NI79 296 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 WDR46O15213 610 aaKnown RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 GH2P01242 217 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 AKR1B1P15121 316 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 HOXA7P31268 230 aaPredicted RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 GUCY1A2P33402 732 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 TROAPQ12815 778 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 VGLL4Q14135 290 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 TTLL12Q14166 644 aaPredicted RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 ASPRV1Q53RT3 343 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 TMEM67Q5HYA8 995 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 RRP12Q5JTH9 1297 aaKnown RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 OTUD7BQ6GQQ9 843 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 RGMBQ6NW40 437 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 CPLX2Q6PUV4 134 aaKnown RBP7.27□□□□□ -1.25
MACF1-228ENST00000528611 CYB5R4Q7L1T6 521 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 SLC44A5Q8NCS7 719 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 PNMA1Q8ND90 353 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 CEP95Q96GE4 821 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 VCPKMTQ9H867 229 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 LY9Q9HBG7 655 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 STX8Q9UNK0 236 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 LIMCH1Q9UPQ0 1083 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 SLC12A7Q9Y666 1083 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 SNCAIPQ9Y6H5 919 aa7.27□□□□□ -1.25
MACF1-228ENST00000528611 A0A0G2JLL6 359 aaPredicted RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 F5H6K3 240 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 hCG_1984214I3L0E3 225 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 PRDM1O75626 825 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 CDKL5O76039 1030 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ALDH1A1P00352 501 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 CETPP11597 493 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 EEF2P13639 858 aaKnown RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 INPP5BP32019 993 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 MAP2K2P36507 400 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 HUNKP57058 714 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ANTXR2P58335 489 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 KLRC3Q07444 240 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 SREBF2Q12772 1141 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 NOGQ13253 232 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 SNAPC2Q13487 334 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 BECN1Q14457 450 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms