RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CDC23Q9UJX2 597 aa11.16□□□□□ -0.62
SF3B2-206ENST00000528302 MACROD2A1Z1Q3 448 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ZPR1O75312 459 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 PTGDRQ13258 359 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-206ENST00000528302 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
SF3B2-206ENST00000528302 TNKSO95271 1327 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ABCC6O95255 1503 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ZNF185O15231 689 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 CTSWP56202 376 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 DYNLL1P63167 89 aaKnown RBP11.15□□□□□ -0.62
SF3B2-206ENST00000528302 CYP27A1Q02318 531 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 KRT31Q15323 416 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
SF3B2-206ENST00000528302 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.63
SF3B2-206ENST00000528302 LRRIQ3A6PVS8 624 aaPredicted RBP11.15□□□□□ -0.63
SF3B2-206ENST00000528302 MFAP3LO75121 409 aa11.15□□□□□ -0.63
SF3B2-206ENST00000528302 IFNAR1P17181 557 aa11.15□□□□□ -0.63
SF3B2-206ENST00000528302 KCNJ6P48051 423 aa11.15□□□□□ -0.63
SF3B2-206ENST00000528302 CASP8Q14790 479 aa11.15□□□□□ -0.63
SF3B2-206ENST00000528302 BEND6Q5SZJ8 279 aaPredicted RBP11.15□□□□□ -0.63
SF3B2-206ENST00000528302 MAFGO15525 162 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 HDXQ7Z353 690 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 ADGRA1Q86SQ6 560 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 CCDC151A5D8V7 595 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 DEXIO95424 95 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 GYG1P46976 350 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 KLK7P49862 253 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 FAM182BQ5T319 152 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 NAPGQ99747 312 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-206ENST00000528302 NACAP1Q9BZK3 213 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 FAM204AQ9H8W3 233 aa11.14□□□□□ -0.63
SF3B2-206ENST00000528302 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
SF3B2-206ENST00000528302 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
SF3B2-206ENST00000528302 SRPRBQ9Y5M8 271 aaKnown RBP11.14□□□□□ -0.63
SF3B2-206ENST00000528302 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-206ENST00000528302 PPARAQ07869 468 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 WASF1Q92558 559 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 MRC1P22897 1456 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 NLRP5P59047 1200 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 KIAA1328Q86T90 577 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 NELFBQ8WX92 580 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 RASSF4Q9H2L5 321 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 ERLIN1O75477 346 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 STARD3NLO95772 234 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 TUBB4AP04350 444 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 CXCR5P32302 372 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 CCDC122Q5T0U0 273 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
SF3B2-206ENST00000528302 FCHSD1Q86WN1 690 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 EHD4Q9H223 541 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
SF3B2-206ENST00000528302 ZNF142P52746 1687 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 SIPA1L3O60292 1781 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 EP400Q96L91 3159 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 KRT2P35908 639 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 CEP112Q8N8E3 955 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 HPS3Q969F9 1004 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 PPP1R3GB7ZBB8 358 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 ACTN2P35609 894 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 TTC38Q5R3I4 469 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 USP54Q70EL1 1684 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 APTXQ7Z2E3 356 aaKnown RBP11.12□□□□□ -0.63
SF3B2-206ENST00000528302 GOLGA6L1Q8N7Z2 621 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 ALS2Q96Q42 1657 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 KRT23Q9C075 422 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 MYO6Q9UM54 1294 aa11.12□□□□□ -0.63
SF3B2-206ENST00000528302 KCNJ18B7U540 433 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 KCNJ12Q14500 433 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms