RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 RAD21O60216 631 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 TSPY3P0CV98 308 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 TSPY8P0CW00 308 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 ALX1Q15699 326 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 TTC22Q5TAA0 569 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 NBPF11Q86T75 865 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
SDHD-205ENST00000528048 TNPO2O14787 897 aaKnown RBP14.39□□□□□ -0.11
SDHD-205ENST00000528048 PRDM1O75626 825 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 FGAP02671 866 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 HSPD1P10809 573 aaKnown RBP14.39□□□□□ -0.11
SDHD-205ENST00000528048 EEF2P13639 858 aaKnown RBP14.39□□□□□ -0.11
SDHD-205ENST00000528048 RASA1P20936 1047 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 HERVK_113P62684 666 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 VPS53Q5VIR6 699 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 CATSPERGQ6ZRH7 1159 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 GPRC5AQ8NFJ5 357 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 RUFY2Q8WXA3 655 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 LPAR1Q92633 364 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 COA7Q96BR5 231 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 ARHGAP39Q9C0H5 1083 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 RPAP3Q9H6T3 665 aaPredicted RBP14.39□□□□□ -0.11
SDHD-205ENST00000528048 CWC22Q9HCG8 908 aaKnown RBP14.39□□□□□ -0.11
SDHD-205ENST00000528048 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 TMX2Q9Y320 296 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 AK9Q5TCS8 1911 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 ADGRA2Q96PE1 1338 aa14.39□□□□□ -0.11
SDHD-205ENST00000528048 A0A1W2PRG0 241 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 VCAM1P19320 739 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 TFAP4Q01664 338 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 FAM110CQ1W6H9 321 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 TRIM47Q96LD4 638 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 TOMM22Q9NS69 142 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 SRRDQ9UH36 339 aa14.38□□□□□ -0.11
SDHD-205ENST00000528048 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 COG2Q14746 738 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 PAGR1Q9BTK6 254 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 VCPKMTQ9H867 229 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 NYAP2Q9P242 653 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 CLIP2Q9UDT6 1046 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 PCDHB13Q9Y5F0 798 aa14.37□□□□□ -0.11
SDHD-205ENST00000528048 TSPY2A6NKD2 308 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 ZNF213O14771 459 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
SDHD-205ENST00000528048 CCNA1P78396 465 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 FAM47AQ5JRC9 791 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
SDHD-205ENST00000528048 CLEC10AQ8IUN9 316 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 NEDD1Q8NHV4 660 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 MORF4L1Q9UBU8 362 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
SDHD-205ENST00000528048 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 PTCH2Q9Y6C5 1203 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 MYPNQ86TC9 1320 aa14.36□□□□□ -0.11
SDHD-205ENST00000528048 ROBO3Q96MS0 1386 aa14.35□□□□□ -0.11
SDHD-205ENST00000528048 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
SDHD-205ENST00000528048 SEC24BO95487 1268 aa14.35□□□□□ -0.11
SDHD-205ENST00000528048 TTLL1O95922 423 aa14.35□□□□□ -0.11
SDHD-205ENST00000528048 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
SDHD-205ENST00000528048 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
SDHD-205ENST00000528048 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.35□□□□□ -0.11
SDHD-205ENST00000528048 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
SDHD-205ENST00000528048 DOCK2Q92608 1830 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 FOXP2O15409 715 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 FLOT1O75955 427 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
SDHD-205ENST00000528048 MAPK4P31152 587 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 NUBP1P53384 320 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 ERVK-24P63145 666 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 CAP1Q01518 475 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
SDHD-205ENST00000528048 CEP95Q96GE4 821 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
SDHD-205ENST00000528048 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
SDHD-205ENST00000528048 F5H6K3 240 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 ORC4O43929 436 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 CTGFP29279 349 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 GRK4P32298 578 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 FLT3LGP49771 235 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 HAND2P61296 217 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 PRKCZQ05513 592 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 KLRC3Q07444 240 aa14.33□□□□□ -0.12
SDHD-205ENST00000528048 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
SDHD-205ENST00000528048 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms