RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
CAPN1-212ENST00000527887 EVX2Q03828 476 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 ICA1Q05084 483 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 NECAB2Q7Z6G3 386 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 APBA2Q99767 749 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 IVNS1ABPQ9Y6Y0 642 aa17.02■□□□□ 0.32
CAPN1-212ENST00000527887 H0YGN5 161 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 STRNO43815 780 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 PEX10O60683 326 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 HOXC6P09630 235 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 PTPREP23469 700 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 AAMPQ13685 434 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 SIAH1Q8IUQ4 282 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
CAPN1-212ENST00000527887 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-212ENST00000527887 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
CAPN1-212ENST00000527887 CHGBP05060 677 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
CAPN1-212ENST00000527887 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 NAV1Q8NEY1 1877 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 OSBP2Q969R2 916 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
CAPN1-212ENST00000527887 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 DSG3P32926 999 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 CACNB2Q08289 660 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-212ENST00000527887 TRIM32Q13049 653 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 GRB14Q14449 540 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 MFSD14CQ5VZR4 134 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
CAPN1-212ENST00000527887 DOCK3Q8IZD9 2030 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
CAPN1-212ENST00000527887 GPAA1O43292 621 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
CAPN1-212ENST00000527887 NACAP1Q9BZK3 213 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 MROH8Q9H579 483 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
CAPN1-212ENST00000527887 COLQQ9Y215 455 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-212ENST00000527887 CEP290O15078 2479 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 EVI5O60447 810 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 FLOT1O75955 427 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
CAPN1-212ENST00000527887 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 ABRAQ8N0Z2 381 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
CAPN1-212ENST00000527887 SLC5A4Q9NY91 659 aa16.97■□□□□ 0.31
CAPN1-212ENST00000527887 MSCO60682 206 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 SLC25A27O95847 323 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 MX1P20591 662 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 TDO2P48775 406 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-212ENST00000527887 KIAA1755Q5JYT7 1200 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 DPP9Q86TI2 863 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 ROBO3Q96MS0 1386 aa16.96■□□□□ 0.31
CAPN1-212ENST00000527887 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 APPP05067 770 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 RASA1P20936 1047 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 COPB2P35606 906 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 CCL14Q16627 93 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 OLFML2BQ68BL8 750 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 ZNF444Q8N0Y2 327 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-212ENST00000527887 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 C11orf49Q9H6J7 331 aa16.95■□□□□ 0.3
CAPN1-212ENST00000527887 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
CAPN1-212ENST00000527887 ERCC3P19447 782 aa16.94■□□□□ 0.3
CAPN1-212ENST00000527887 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
CAPN1-212ENST00000527887 LHX8Q68G74 356 aa16.94■□□□□ 0.3
CAPN1-212ENST00000527887 IFNL3Q8IZI9 196 aa16.94■□□□□ 0.3
CAPN1-212ENST00000527887 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN1-212ENST00000527887 PLXNB2O15031 1838 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 M0R2C6 588 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 IGHA2P01877 340 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 ADORA2AP29274 412 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-212ENST00000527887 PDE4BQ07343 736 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 CLEC10AQ8IUN9 316 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 MKL1Q969V6 931 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 EPB41L4AQ9HCS5 686 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-212ENST00000527887 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 PPP1R9AQ9ULJ8 1098 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms