RNA–Protein interactions for RNA: ENST00000527029.1

ALKBH3-203, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-203ENST00000527029 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
ALKBH3-203ENST00000527029 OSBPL3Q9H4L5 887 aa18.53■□□□□ 0.56
ALKBH3-203ENST00000527029 IVNS1ABPQ9Y6Y0 642 aa18.53■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L15C9J2P7 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L13C9JLJ4 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L11C9JVI0 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L18D6R9N7 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L22D6RA61 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L17D6RBQ6 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L19D6RCP7 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L20D6RJB6 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 ITGB8P26012 769 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 USP17L24Q0WX57 530 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 OS9Q13438 667 aaPredicted RBP18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 SPATA5Q8NB90 893 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
ALKBH3-203ENST00000527029 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 ADCYAP1R1P41586 468 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 TFCP2Q12800 502 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 ZYXQ15942 572 aaKnown RBP18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 MAPKAPK5Q8IW41 473 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 TGFBRAP1Q8WUH2 860 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 C12orf42Q96LP6 360 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 TRIM34Q9BYJ4 488 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 BTBD7Q9P203 1132 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.51■□□□□ 0.55
ALKBH3-203ENST00000527029 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 CDC45O75419 566 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 TLE2Q04725 743 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 C1orf53Q5VUE5 145 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 CATSPERGQ6ZRH7 1159 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 FAM122AQ96E09 287 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 AATFQ9NY61 560 aaKnown RBP eCLIP18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 AKAP2Q9Y2D5 859 aa18.5■□□□□ 0.55
ALKBH3-203ENST00000527029 FLT1P17948 1338 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 SEPT4O43236 478 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 GH2P01242 217 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 DNAJB2P25686 324 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 TTC22Q5TAA0 569 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 LBX2Q6XYB7 198 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 LRP2BPQ9P2M1 347 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 TACC3Q9Y6A5 838 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
ALKBH3-203ENST00000527029 G3BP1Q13283 466 aaKnown RBP eCLIP18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 LRRC41Q15345 812 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 OLFML2BQ68BL8 750 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 ATXN2LQ8WWM7 1075 aaKnown RBP18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 FEZ1Q99689 392 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 ZNF576Q9H609 170 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 CHD9Q3L8U1 2897 aa18.48■□□□□ 0.55
ALKBH3-203ENST00000527029 FOCADQ5VW36 1801 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 BAG3O95817 575 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 PLCG2P16885 1265 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 VCAM1P19320 739 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 MCAMP43121 646 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 PPP4CP60510 307 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 PPM1EQ8WY54 764 aa18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 SAP30BPQ9UHR5 308 aaKnown RBP18.47■□□□□ 0.55
ALKBH3-203ENST00000527029 SPDYE16A6NNV3 312 aaPredicted RBP18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 ERC2O15083 957 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 CLTBP09497 229 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 MX1P20591 662 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 ADORA2AP29274 412 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 BECN1Q14457 450 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 GORABQ5T7V8 394 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 NAA16Q6N069 864 aaPredicted RBP18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 ADAMTS19Q8TE59 1207 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 TIFAQ96CG3 184 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 ASB2Q96Q27 587 aa18.46■□□□□ 0.55
ALKBH3-203ENST00000527029 ZNF236Q9UL36 1845 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 APBB1O00213 710 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 KIAA0355O15063 1070 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 RAG1P15918 1043 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 USP14P54578 494 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 ADGRA1Q86SQ6 560 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 ACER1Q8TDN7 264 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
ALKBH3-203ENST00000527029 COBLO75128 1261 aa18.44■□□□□ 0.54
ALKBH3-203ENST00000527029 HLA-DOAP06340 250 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms