RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 LACTBP83111 547 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 TRIM47Q96LD4 638 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 HELLSQ9NRZ9 838 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 ARPP21Q9UBL0 812 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 HPS5Q9UPZ3 1129 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 TRIM17Q9Y577 477 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 DOCK3Q8IZD9 2030 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 ROBO3Q96MS0 1386 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 C19orf81C9J6K1 198 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 GNAT2P19087 354 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 HOXA7P31268 230 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 MCMDC2Q4G0Z9 681 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 TTC22Q5TAA0 569 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 ERO1AQ96HE7 468 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 C12orf42Q96LP6 360 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 PARK7Q99497 189 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 TBC1D2Q9BYX2 928 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 KIAA1683Q9H0B3 1180 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 RBPJLQ9UBG7 517 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 PTPN22Q9Y2R2 807 aa10.6□□□□□ -0.71
CCDC90B-208ENST00000527025 IGKV6D-41A0A0C4DH26 115 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 CCDC85CA6NKD9 419 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 FGAP02671 866 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 PSMC4P43686 418 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 TDO2P48775 406 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 CTDSPL2Q05D32 466 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 PPARAQ07869 468 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 LRRFIP1Q32MZ4 808 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 Q3C1V9 767 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 FBXO46Q6PJ61 603 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 CABP5Q9NP86 173 aa10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-208ENST00000527025 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 PARP14Q460N5 1801 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 CNMDO75829 334 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 VCAM1P19320 739 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 ALX1Q15699 326 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 CATSPERGQ6ZRH7 1159 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 SPNS2Q8IVW8 549 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 GABRQQ9UN88 632 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 TMX2Q9Y320 296 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 PTCH2Q9Y6C5 1203 aa10.58□□□□□ -0.72
CCDC90B-208ENST00000527025 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 FGRP09769 529 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 OSBPP22059 807 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 HERVK_113P62684 666 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 PKN2Q16513 984 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 TICAM2Q86XR7 235 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 FEZ1Q99689 392 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 NAPBQ9H115 298 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 ANAPC4Q9UJX5 808 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
CCDC90B-208ENST00000527025 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 NMT2O60551 498 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 HAND2P61296 217 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 ICA1Q05084 483 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 PRKCZQ05513 592 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 NACAP1Q9BZK3 213 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 RPAP3Q9H6T3 665 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 MKNK2Q9HBH9 465 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 BTBD7Q9P203 1132 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-208ENST00000527025 SPDYE16A6NNV3 312 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms