RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NCOA7Q8NI08 942 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 IPO9Q96P70 1041 aaKnown RBP14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 CNNM2Q9H8M5 875 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 AS3MTQ9HBK9 375 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 ZBTB21Q9ULJ3 1066 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 TAF6LQ9Y6J9 622 aa14.95□□□□□ -0.02
SSSCA1-203ENST00000526877 FMNL1O95466 1100 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 POLR3DP05423 398 aaPredicted RBP14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 RPS6KB1P23443 525 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 GABPAQ06546 454 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 AKNAD1Q5T1N1 836 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 MFSD6Q6ZSS7 791 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 PDRG1Q9NUG6 133 aa14.94□□□□□ -0.02
SSSCA1-203ENST00000526877 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 GH2P01242 217 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 PCP11498 1178 aaKnown RBP14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 HOXD10P28358 340 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 SHMT1P34896 483 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 MTMR2Q13614 643 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 C12orf60Q5U649 245 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 STOX1Q6ZVD7 989 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 SH3TC2Q8TF17 1288 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 STAG1Q8WVM7 1258 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 KRT23Q9C075 422 aa14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 ASCC2Q9H1I8 757 aaPredicted RBP14.93□□□□□ -0.02
SSSCA1-203ENST00000526877 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 GUCY1A2P33402 732 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 FCGRTP55899 365 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 DHX32Q7L7V1 743 aaKnown RBP14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 TBC1D10CQ8IV04 446 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 ANKRD13CQ8N6S4 541 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 SMCR8Q8TEV9 937 aaPredicted RBP14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 NBPF3Q9H094 633 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 ALDH8A1Q9H2A2 487 aaPredicted RBP14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 PNMA3Q9UL41 463 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 GABRQQ9UN88 632 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 MYPNQ86TC9 1320 aa14.92□□□□□ -0.02
SSSCA1-203ENST00000526877 CYP2D7A0A087X1C5 515 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 CYP2D6P10635 497 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 CPA1P15085 419 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 EN2P19622 333 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 MCM5P33992 734 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 GCLCP48506 637 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 FGD1P98174 961 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 PRKCZQ05513 592 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 PDE4BQ07343 736 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 PABPC4Q13310 644 aaKnown RBP eCLIP14.91□□□□□ -0.024e-8■■■■□ 20.3
SSSCA1-203ENST00000526877 FAM110CQ1W6H9 321 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 CERKLQ49MI3 558 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 TTC14Q96N46 770 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 P2RX7Q99572 595 aaKnown RBP14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 ZNF287Q9HBT7 754 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 WDR19Q8NEZ3 1342 aa14.91□□□□□ -0.02
SSSCA1-203ENST00000526877 K7ELQ4 463 aaPredicted RBP14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 GRK4P32298 578 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 NT5C2P49902 561 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 POTEEQ6S8J3 1075 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 MORF4L1Q9UBU8 362 aa14.9□□□□□ -0.02
SSSCA1-203ENST00000526877 B4E1Z4 1266 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 SMIM22K7EJ46 135 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 AK2P54819 239 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L2Q6R6M4 530 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 MB21D2Q8IYB1 491 aaPredicted RBP14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 RAET1EQ8TD07 263 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 ACER1Q8TDN7 264 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 ESR2Q92731 530 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 C12orf42Q96LP6 360 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 TMEM106CQ9BVX2 250 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 MKNK2Q9HBH9 465 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 NEDD4P46934 1319 aa14.89□□□□□ -0.03
SSSCA1-203ENST00000526877 MYH8P13535 1937 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 TNPO2O14787 897 aaKnown RBP14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 PRC1O43663 620 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 ORC4O43929 436 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 PEX10O60683 326 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 CD2BP2O95400 341 aaKnown RBP14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 MYCP01106 439 aaPredicted RBP14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 FGRP09769 529 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 FLT3LGP49771 235 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 IRF5Q13568 498 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 RAB3GAP1Q15042 981 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 MTFR1Q15390 333 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 Q6ZUG5 572 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 DYNLL2Q96FJ2 89 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms