RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 USP17L19D6RCP7 530 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 USP17L20D6RJB6 530 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 FLT3LGP49771 235 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 USP17L24Q0WX57 530 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 CATSPERGQ6ZRH7 1159 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 ARMC5Q96C12 935 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 ZNF333Q96JL9 665 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.28
SNRNP35-203ENST00000526639 MGAMO43451 1857 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 RAD21O60216 631 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 RASA1P20936 1047 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 SKAP1Q86WV1 359 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 ARHGEF10LQ9HCE6 1279 aa13.27□□□□□ -0.29
SNRNP35-203ENST00000526639 DOCK3Q8IZD9 2030 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 PDE4AP27815 886 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 PRMT2P55345 433 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 MCMDC2Q4G0Z9 681 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 GPRC5AQ8NFJ5 357 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 COA7Q96BR5 231 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 KANSL2Q9H9L4 492 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
SNRNP35-203ENST00000526639 SDSP20132 328 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 GRK4P32298 578 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 PPARAQ07869 468 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 ELNP15502 786 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 ERVK-24P63145 666 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 CTDSPL2Q05D32 466 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 MTFR1Q15390 333 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 PORCNQ9H237 461 aa13.25□□□□□ -0.29
SNRNP35-203ENST00000526639 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
SNRNP35-203ENST00000526639 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
SNRNP35-203ENST00000526639 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
SNRNP35-203ENST00000526639 SPDYE16A6NNV3 312 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 ADCY3O60266 1144 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 FGAP02671 866 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 HSPD1P10809 573 aaKnown RBP13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 PDE4BQ07343 736 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 COG2Q14746 738 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 BTBD7Q9P203 1132 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 CNMDO75829 334 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 FLOT1O75955 427 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 LPAR1Q92633 364 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 CLIP2Q9UDT6 1046 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 GJD2Q9UKL4 321 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
SNRNP35-203ENST00000526639 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 TSPY3P0CV98 308 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 TSPY8P0CW00 308 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 WDR78Q5VTH9 848 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 HOXC10Q9NYD6 342 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
SNRNP35-203ENST00000526639 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 TFAP4Q01664 338 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 GPR142Q7Z601 462 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 CYP2B6P20813 491 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 MAPK4P31152 587 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 HAND2P61296 217 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 IRF5Q13568 498 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 LBX2Q6XYB7 198 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 TICAM2Q86XR7 235 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
SNRNP35-203ENST00000526639 IGKV6D-41A0A0C4DH26 115 aa13.2□□□□□ -0.3
SNRNP35-203ENST00000526639 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms