RNA–Protein interactions for RNA: ENST00000526161.5

TRIM29-208, Transcript of tripartite motif containing 29, humanhuman

TSL 1 (best)

Gene TRIM29, Length 1,836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-208ENST00000526161 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
TRIM29-208ENST00000526161 MYH8P13535 1937 aa18.26■□□□□ 0.51
TRIM29-208ENST00000526161 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
TRIM29-208ENST00000526161 HSPA1AP0DMV8 641 aaKnown RBP18.26■□□□□ 0.51
TRIM29-208ENST00000526161 HSPA1BP0DMV9 641 aaKnown RBP18.26■□□□□ 0.51
TRIM29-208ENST00000526161 TAF1CQ15572 869 aaPredicted RBP18.26■□□□□ 0.51
TRIM29-208ENST00000526161 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
TRIM29-208ENST00000526161 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 F5H6K3 240 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 CYP2C8P10632 490 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 KLRC3Q07444 240 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 COL9A3Q14050 684 aaPredicted RBP18.25■□□□□ 0.51
TRIM29-208ENST00000526161 ADCK5Q3MIX3 580 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
TRIM29-208ENST00000526161 CA12O43570 354 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 EIF5BO60841 1220 aaKnown RBP18.24■□□□□ 0.51
TRIM29-208ENST00000526161 MCCP23508 829 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIM29-208ENST00000526161 CRHR2Q13324 411 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 RCSD1Q6JBY9 416 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
TRIM29-208ENST00000526161 LPAR1Q92633 364 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 TTC14Q96N46 770 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 TMEM47Q9BQJ4 181 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
TRIM29-208ENST00000526161 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
TRIM29-208ENST00000526161 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 TNKSO95271 1327 aa18.24■□□□□ 0.51
TRIM29-208ENST00000526161 NOVP48745 357 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 KRT32Q14532 448 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 KCNB2Q92953 911 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 ZFYVE28Q9HCC9 887 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 SLC45A1Q9Y2W3 748 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 NDUFB10O96000 172 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
TRIM29-208ENST00000526161 ASCC2Q9H1I8 757 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-208ENST00000526161 GREB1LQ9C091 1923 aaPredicted RBP18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L15C9J2P7 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L13C9JLJ4 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L11C9JVI0 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L18D6R9N7 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L22D6RA61 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L17D6RBQ6 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L19D6RCP7 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L20D6RJB6 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 FOXN1O15353 648 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 OSBPP22059 807 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 MCM5P33992 734 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 ANTXR2P58335 489 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 USP17L24Q0WX57 530 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 SMCR8Q8TEV9 937 aaPredicted RBP18.22■□□□□ 0.51
TRIM29-208ENST00000526161 PARK7Q99497 189 aaKnown RBP18.22■□□□□ 0.51
TRIM29-208ENST00000526161 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
TRIM29-208ENST00000526161 ERICH2A1L162 156 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 PRC1O43663 620 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 GMCL1P1Q8NEA9 526 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 KAT14Q9H8E8 782 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 CATSPERGQ6ZRH7 1159 aa18.21■□□□□ 0.51
TRIM29-208ENST00000526161 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
TRIM29-208ENST00000526161 TLR2O60603 784 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 SLC1A4P43007 532 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 SEC23AQ15436 765 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 TCEANC2Q96MN5 208 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 LRRC2Q9BYS8 371 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
TRIM29-208ENST00000526161 FLOT1O75955 427 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 CPA1P15085 419 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 WTAPQ15007 396 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 PNMA1Q8ND90 353 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 CFHR5Q9BXR6 569 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 SENP2Q9HC62 589 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
TRIM29-208ENST00000526161 PTPRFP10586 1907 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
TRIM29-208ENST00000526161 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms