RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 SNCAIPQ9Y6H5 919 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 TOMM70O94826 608 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 PTPRAP18433 802 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 RXRAP19793 462 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 SIAH1Q8IUQ4 282 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 RBM46Q8TBY0 533 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 GTF3C6Q969F1 213 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 MKL1Q969V6 931 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 FEZ1Q99689 392 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 HPS5Q9UPZ3 1129 aa18.5■□□□□ 0.55
TSPAN4-213ENST00000524895 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 RAD21O60216 631 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 ECE1P42892 770 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 TROAPQ12815 778 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 RTN1Q16799 776 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 ACER1Q8TDN7 264 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 NID2Q14112 1375 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 TRPM7Q96QT4 1865 aa18.49■□□□□ 0.55
TSPAN4-213ENST00000524895 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 UNCXA6NJT0 531 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 SCRN1Q12765 414 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 LDLRAD1Q5T700 205 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 CHMP4CQ96CF2 233 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 CLMNQ96JQ2 1002 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 WDR18Q9BV38 432 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 NCOA5Q9HCD5 579 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 TMX2Q9Y320 296 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 ZHX2Q9Y6X8 837 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 PASKQ96RG2 1323 aa18.48■□□□□ 0.55
TSPAN4-213ENST00000524895 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 KIF5BP33176 963 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 GRM4Q14833 912 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 ZYXQ15942 572 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 FANCBQ8NB91 859 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 ZNF280CQ8ND82 737 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 GMCL1P1Q8NEA9 526 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 MAP3K14Q99558 947 aa18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 RBM28Q9NW13 759 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-213ENST00000524895 F5H6K3 240 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 CPLX1O14810 134 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 PDHBP11177 359 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 KLRC3Q07444 240 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 SPP2Q13103 211 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 MTMR2Q13614 643 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 CUL4AQ13619 759 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 CCDC96Q2M329 555 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 CST9Q5W186 159 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 CPLX2Q6PUV4 134 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 KIAA1683Q9H0B3 1180 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 ISY1Q9ULR0 285 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 PHIPQ8WWQ0 1821 aa18.46■□□□□ 0.55
TSPAN4-213ENST00000524895 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 TRIM75PA6NK02 468 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 NDUFB10O96000 172 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 USP14P54578 494 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 PPATQ06203 517 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 ST3GAL1Q11201 340 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 FSTL1Q12841 308 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 DCAF4Q8WV16 495 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 VCPKMTQ9H867 229 aa18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.45■□□□□ 0.54
TSPAN4-213ENST00000524895 CDKL5O76039 1030 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 CDC27P30260 824 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 ADD1P35611 737 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 SLC1A4P43007 532 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 BACE1P56817 501 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 SPICE1Q8N0Z3 855 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 OPTNQ96CV9 577 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 SLC10A4Q96EP9 437 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 GMCL1Q96IK5 515 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 AFG3L2Q9Y4W6 797 aa18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-213ENST00000524895 GOLGA8HP0CJ92 632 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms