RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CEP44	Q9C0F1	390 aa		7.16	□□□□□ -1.26
PCM1-223	ENST00000524356	CNTD2	Q9H8S5	307 aa		7.16	□□□□□ -1.26
PCM1-223	ENST00000524356	HRK	O00198	91 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	PRICKLE3	O43900	615 aa	Predicted RBP	7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	LTK	P29376	864 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	GRK4	P32298	578 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	CHRNE	Q04844	493 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	SPPL2C	Q8IUH8	684 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	SIRT2	Q8IXJ6	389 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	PPP1R13L	Q8WUF5	828 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	GAL3ST3	Q96A11	431 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	GPATCH2	Q9NW75	528 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	CYP8B1	Q9UNU6	501 aa		7.15	□□□□□ -1.26
PCM1-223	ENST00000524356	RTP5	Q14D33	572 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	PCNX4	Q63HM2	1172 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	DNAJB8	Q8NHS0	232 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	GPR20	Q99678	358 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	SIRT5	Q9NXA8	310 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	SERPINA10	Q9UK55	444 aa		7.14	□□□□□ -1.27
PCM1-223	ENST00000524356	BICRA	Q9NZM4	1560 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	CILP	O75339	1184 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	VIPR1	P32241	457 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	ETV3	P41162	512 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	NLRX1	Q86UT6	975 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	ANKS4B	Q8N8V4	417 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	DTWD2	Q8NBA8	298 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	SNCAIP	Q9Y6H5	919 aa		7.13	□□□□□ -1.27
PCM1-223	ENST00000524356	OVOL3	O00110	214 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	CELA3A	P09093	270 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	TNFRSF1A	P19438	455 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	CDR1	P51861	262 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	TEK	Q02763	1124 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	CNKSR3	Q6P9H4	555 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	FAM129C	Q86XR2	697 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	LINC01356	Q8N9X3	169 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	LINC01599	Q8WXQ3	324 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	DMRTB1	Q96MA1	342 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	G6PC3	Q9BUM1	346 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	TJP2	Q9UDY2	1190 aa		7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	CCDC9	Q9Y3X0	531 aa	Known RBP	7.12	□□□□□ -1.27
PCM1-223	ENST00000524356	ZXDA	P98168	799 aa		7.11	□□□□□ -1.27
PCM1-223	ENST00000524356	MRPL41	Q8IXM3	137 aa	Known RBP	7.11	□□□□□ -1.27
PCM1-223	ENST00000524356	PPM1H	Q9ULR3	514 aa		7.11	□□□□□ -1.27
PCM1-223	ENST00000524356	GSTT1	P30711	240 aa		7.1	□□□□□ -1.27
PCM1-223	ENST00000524356	DUSP4	Q13115	394 aa		7.1	□□□□□ -1.27
PCM1-223	ENST00000524356	NACAD	O15069	1562 aa		7.1	□□□□□ -1.27
PCM1-223	ENST00000524356	CECR2	Q9BXF3	1484 aa		7.1	□□□□□ -1.27
PCM1-223	ENST00000524356	ARID3C	A6NKF2	412 aa		7.09	□□□□□ -1.27
PCM1-223	ENST00000524356	SDHB	P21912	280 aa		7.09	□□□□□ -1.27
PCM1-223	ENST00000524356	MZB1	Q8WU39	189 aa		7.09	□□□□□ -1.27
PCM1-223	ENST00000524356	RBCK1	Q9BYM8	510 aa		7.09	□□□□□ -1.27
PCM1-223	ENST00000524356	ZNF281	Q9Y2X9	895 aa		7.09	□□□□□ -1.27
PCM1-223	ENST00000524356	GFRA2	O00451	464 aa		7.08	□□□□□ -1.28
PCM1-223	ENST00000524356	YBX1	P67809	324 aa	Known RBP	7.08	□□□□□ -1.28
PCM1-223	ENST00000524356	SYTL4	Q96C24	671 aa	Predicted RBP	7.08	□□□□□ -1.28
PCM1-223	ENST00000524356	TMEM87B	Q96K49	555 aa		7.08	□□□□□ -1.28
PCM1-223	ENST00000524356	CEP131	Q9UPN4	1083 aa		7.08	□□□□□ -1.28
PCM1-223	ENST00000524356	ZBTB7C	A1YPR0	619 aa		7.07	□□□□□ -1.28
PCM1-223	ENST00000524356	IGDCC3	Q8IVU1	814 aa		7.07	□□□□□ -1.28
PCM1-223	ENST00000524356	ANKRD24	Q8TF21	1146 aa		7.07	□□□□□ -1.28
PCM1-223	ENST00000524356	VWCE	Q96DN2	955 aa		7.07	□□□□□ -1.28
PCM1-223	ENST00000524356	PWWP2A	Q96N64	755 aa		7.07	□□□□□ -1.28
PCM1-223	ENST00000524356		K7ESM1	405 aa		7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	MATN3	O15232	486 aa		7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	USP2	O75604	605 aa	Predicted RBP	7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	PDIA4	P13667	645 aa	Known RBP	7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	PLCB3	Q01970	1234 aa		7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	CNOT11	Q9UKZ1	510 aa	Known RBP	7.06	□□□□□ -1.28
PCM1-223	ENST00000524356	UNC13A	Q9UPW8	1703 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	LRRN2	O75325	713 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	ZFYVE27	Q5T4F4	411 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	SLC6A19	Q695T7	634 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	SLC16A11	Q8NCK7	471 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	OSBPL7	Q9BZF2	842 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	CRTAC1	Q9NQ79	661 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	KCNH3	Q9ULD8	1083 aa		7.05	□□□□□ -1.28
PCM1-223	ENST00000524356	PNMA6F	A0A0J9YX94	578 aa		7.04	□□□□□ -1.28
PCM1-223	ENST00000524356	SHISA3	A0PJX4	238 aa		7.04	□□□□□ -1.28
PCM1-223	ENST00000524356	PGR	P06401	933 aa		7.04	□□□□□ -1.28
PCM1-223	ENST00000524356	PALD1	Q9ULE6	856 aa		7.04	□□□□□ -1.28
PCM1-223	ENST00000524356	CC2D2A	Q9P2K1	1620 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	FFAR3	O14843	346 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	NRDC	O43847	1150 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	MAGEA10	P43363	369 aa	Predicted RBP	7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	ZNF827	Q17R98	1081 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	TMC7	Q7Z402	723 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	MCAT	Q8IVS2	390 aa	Known RBP	7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	TACC3	Q9Y6A5	838 aa		7.03	□□□□□ -1.28
PCM1-223	ENST00000524356	RBM47	A0AV96	593 aa	Known RBP	7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	GRIN3B	O60391	1043 aa		7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	SLURP1	P55000	103 aa		7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	ENOX2	Q16206	610 aa	Known RBP	7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	LDHD	Q86WU2	507 aa		7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	ACSF2	Q96CM8	615 aa	Predicted RBP	7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	SRCIN1	Q9C0H9	1055 aa		7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	SRRD	Q9UH36	339 aa		7.02	□□□□□ -1.29
PCM1-223	ENST00000524356	FSHB	P01225	129 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms