RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SLFN12Q8IYM2 578 aa7.63□□□□□ -1.19
SKP1-211ENST00000523359 PHACTR4Q8IZ21 702 aa7.63□□□□□ -1.19
SKP1-211ENST00000523359 CNNM2Q9H8M5 875 aa7.63□□□□□ -1.19
SKP1-211ENST00000523359 PRKAG3Q9UGI9 489 aa7.63□□□□□ -1.19
SKP1-211ENST00000523359 CEACAM5P06731 702 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 POLR2BP30876 1174 aaKnown RBP7.62□□□□□ -1.19
SKP1-211ENST00000523359 PPP2R5EQ16537 467 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 IFI16Q16666 785 aaKnown RBP7.62□□□□□ -1.19
SKP1-211ENST00000523359 AOC3Q16853 763 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 ANKS3Q6ZW76 656 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 MFSD2AQ8NA29 543 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 HNRNPLLQ8WVV9 542 aaKnown RBP7.62□□□□□ -1.19
SKP1-211ENST00000523359 KIF2CQ99661 725 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 TM9SF2Q99805 663 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 PLAGL2Q9UPG8 496 aa7.62□□□□□ -1.19
SKP1-211ENST00000523359 FAM86C2PA6NEL3 165 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 TNFRSF10CO14798 259 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 ACRP10323 421 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 FUT4P22083 530 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 GUCY2CP25092 1073 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 PRKCQQ04759 706 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 HRASLS5Q96KN8 279 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 SLC9A7Q96T83 725 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 MIPEPQ99797 713 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 HIRIP3Q9BW71 556 aaPredicted RBP7.61□□□□□ -1.19
SKP1-211ENST00000523359 MKNK2Q9HBH9 465 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 VAV3Q9UKW4 847 aa7.61□□□□□ -1.19
SKP1-211ENST00000523359 GBP1P32455 592 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 RBL2Q08999 1139 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 TNNI3KQ59H18 835 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 TTC6Q86TZ1 520 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 CKAP2LQ8IYA6 745 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 RIN3Q8TB24 985 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 BAHD1Q8TBE0 780 aaPredicted RBP7.6□□□□□ -1.19
SKP1-211ENST00000523359 CYB5D2Q8WUJ1 264 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 CCDC74BQ96LY2 380 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
SKP1-211ENST00000523359 TNKS2Q9H2K2 1166 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
SKP1-211ENST00000523359 PRDM10Q9NQV6 1147 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 ACTR10Q9NZ32 417 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 ADAMTS6Q9UKP5 1117 aa7.6□□□□□ -1.19
SKP1-211ENST00000523359 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
SKP1-211ENST00000523359 TMEM265A0A087WTH1 108 aa7.59□□□□□ -1.19
SKP1-211ENST00000523359 A0A1W2PQH9 124 aa7.59□□□□□ -1.19
SKP1-211ENST00000523359 SLITRK5O94991 958 aa7.59□□□□□ -1.19
SKP1-211ENST00000523359 RNASE1P07998 156 aaKnown RBP7.59□□□□□ -1.19
SKP1-211ENST00000523359 ZYXQ15942 572 aaKnown RBP7.59□□□□□ -1.19
SKP1-211ENST00000523359 INTS3Q68E01 1043 aaKnown RBP7.59□□□□□ -1.19
SKP1-211ENST00000523359 UNC5AQ6ZN44 842 aa7.59□□□□□ -1.19
SKP1-211ENST00000523359 TAB3Q8N5C8 712 aaPredicted RBP7.59□□□□□ -1.19
SKP1-211ENST00000523359 MBNL3Q9NUK0 354 aaKnown RBP7.59□□□□□ -1.19
SKP1-211ENST00000523359 BIN1O00499 593 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 RGS13O14921 159 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 KLF4O43474 513 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 UBOX5O94941 541 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 CASP7P55210 303 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 LETMD1Q6P1Q0 360 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 CDH24Q86UP0 819 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 C19orf47Q8N9M1 422 aaKnown RBP7.58□□□□□ -1.2
SKP1-211ENST00000523359 PI4K2BQ8TCG2 481 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
SKP1-211ENST00000523359 LARP1BQ659C4 914 aaKnown RBP7.57□□□□□ -1.2
SKP1-211ENST00000523359 FAM214BQ7L5A3 538 aa7.57□□□□□ -1.2
SKP1-211ENST00000523359 POU5F2Q8N7G0 328 aa7.57□□□□□ -1.2
SKP1-211ENST00000523359 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
SKP1-211ENST00000523359 LTBP3Q9NS15 1303 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 RBAK-RBAKDNI3L0D1 243 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 C8AP07357 584 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 RAB33AQ14088 237 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 TRIM55Q9BYV6 548 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 GTF2IRD1Q9UHL9 959 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
SKP1-211ENST00000523359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
SKP1-211ENST00000523359 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
SKP1-211ENST00000523359 EOMESO95936 686 aa7.55□□□□□ -1.2
SKP1-211ENST00000523359 ANGEL2Q5VTE6 544 aaKnown RBP7.55□□□□□ -1.2
SKP1-211ENST00000523359 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
SKP1-211ENST00000523359 CELF2-AS1Q8N7Q2 184 aa7.55□□□□□ -1.2
SKP1-211ENST00000523359 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
SKP1-211ENST00000523359 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
SKP1-211ENST00000523359 PRDM7Q9NQW5 492 aa7.55□□□□□ -1.2
SKP1-211ENST00000523359 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
SKP1-211ENST00000523359 CCNFP41002 786 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 CHMP4BP1P59074 171 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 FZD5Q13467 585 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 SOGA3Q5TF21 947 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 FAM168AQ92567 244 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 ZNF512BQ96KM6 892 aaPredicted RBP7.54□□□□□ -1.2
SKP1-211ENST00000523359 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 ST7Q9NRC1 585 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 PCDHB10Q9UN67 800 aa7.54□□□□□ -1.2
SKP1-211ENST00000523359 SNX11Q9Y5W9 270 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms