RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 VWA3AA6NCI4 1184 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 ARHGAP44Q17R89 818 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 LONRF2Q1L5Z9 754 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 CSGALNACT2Q8N6G5 542 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 OLA1Q9NTK5 396 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 PDE4DQ08499 809 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 ATG16L1Q676U5 607 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 C4orf50Q6ZRC1 276 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 IGF1RP08069 1367 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 F8W8V4 182 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 STAM2O75886 525 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 PAK1Q13153 545 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 ELF2Q15723 593 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 GLE1Q53GS7 698 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 H3BRJ5 948 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 WBP4O75554 376 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 ADCY8P40145 1251 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 SRRM1Q8IYB3 904 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 IFIH1Q9BYX4 1025 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 TRIM8Q9BZR9 551 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 SYCE1LA8MT33 242 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 PICALMQ13492 652 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 HADHQ16836 314 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 KPNA2P52292 529 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 TYW5A2RUC4 315 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 ARHGEF35A5YM69 484 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 NR1I2O75469 434 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 MRPL28Q13084 256 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 NBPF5PQ86XG9 351 aaPredicted RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
EXTL3-214ENST00000523271 GNGT1P63211 74 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 ITKQ08881 620 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 TEX9Q8N6V9 391 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 SAR1BQ9Y6B6 198 aa13.61□□□□□ -0.23
EXTL3-214ENST00000523271 PPP2R5AQ15172 486 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 ZKSCAN8Q15776 578 aaPredicted RBP13.6□□□□□ -0.23
EXTL3-214ENST00000523271 TRPA1O75762 1119 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 TTC25Q96NG3 672 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 GIPC2Q8TF65 315 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
EXTL3-214ENST00000523271 VPS16Q9H269 839 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 CAPN9O14815 690 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
EXTL3-214ENST00000523271 SP4Q02446 784 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 FRMD3A2A2Y4 597 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 MYRIPQ8NFW9 859 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 GPTP24298 496 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
EXTL3-214ENST00000523271 CARD6Q9BX69 1037 aa13.6□□□□□ -0.23
EXTL3-214ENST00000523271 APBA1Q02410 837 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 ART3Q13508 389 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 TRIM37O94972 964 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 LZICQ8WZA0 190 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 TSC1Q92574 1164 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 INHBAP08476 426 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 LRRC37BQ96QE4 947 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 SERPINB2P05120 415 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 KRIT1O00522 736 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 EEF1GP26641 437 aaKnown RBP13.59□□□□□ -0.23
EXTL3-214ENST00000523271 MAP3K10Q02779 954 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 OPTNQ96CV9 577 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 CAPN11Q9UMQ6 739 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 GRM1Q13255 1194 aa13.59□□□□□ -0.23
EXTL3-214ENST00000523271 TSTA3Q13630 321 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms