RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 A0A1W2PRG0 241 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 GSG1L2A8MUP6 293 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 GPAA1O43292 621 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 CYP2B6P20813 491 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 RGS2P41220 211 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 PORCNQ9H237 461 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
PVT1-216ENST00000523068 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
PVT1-216ENST00000523068 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
PVT1-216ENST00000523068 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
PVT1-216ENST00000523068 MINDY4BA8MYZ0 360 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
PVT1-216ENST00000523068 PEX10O60683 326 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
PVT1-216ENST00000523068 APPP05067 770 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 TDO2P48775 406 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 DEFB118Q96PH6 123 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 HTATIP2Q9BUP3 242 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 NACAP1Q9BZK3 213 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.324e-6■■■□□ 17.4
PVT1-216ENST00000523068 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
PVT1-216ENST00000523068 IVNS1ABPQ9Y6Y0 642 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 COL11A1P12107 1806 aaPredicted RBP13.03□□□□□ -0.32
PVT1-216ENST00000523068 ROBO3Q96MS0 1386 aa13.03□□□□□ -0.32
PVT1-216ENST00000523068 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 M0R2C6 588 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
PVT1-216ENST00000523068 CNMDO75829 334 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 FARP2O94887 1054 aaPredicted RBP13.02□□□□□ -0.33
PVT1-216ENST00000523068 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 MORN1Q5T089 497 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 WDR78Q5VTH9 848 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 MB21D1Q8N884 522 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
PVT1-216ENST00000523068 USP6NLQ92738 828 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 APBA2Q99767 749 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 SALL3Q9BXA9 1300 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
PVT1-216ENST00000523068 SLC15A5A6NIM6 579 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 FLOT1O75955 427 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
PVT1-216ENST00000523068 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
PVT1-216ENST00000523068 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 IFNL3Q8IZI9 196 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 TRIB2Q92519 343 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
PVT1-216ENST00000523068 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
PVT1-216ENST00000523068 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
PVT1-216ENST00000523068 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
PVT1-216ENST00000523068 PTPREP23469 700 aa13□□□□□ -0.33
PVT1-216ENST00000523068 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
PVT1-216ENST00000523068 DSG3P32926 999 aa13□□□□□ -0.33
PVT1-216ENST00000523068 MAP2K5Q13163 448 aa13□□□□□ -0.33
PVT1-216ENST00000523068 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
PVT1-216ENST00000523068 TICAM2Q86XR7 235 aa13□□□□□ -0.33
PVT1-216ENST00000523068 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
PVT1-216ENST00000523068 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
PVT1-216ENST00000523068 DPF3Q92784 378 aa13□□□□□ -0.33
PVT1-216ENST00000523068 EVI5LQ96CN4 794 aa13□□□□□ -0.33
PVT1-216ENST00000523068 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
PVT1-216ENST00000523068 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
PVT1-216ENST00000523068 NAPBQ9H115 298 aa13□□□□□ -0.33
PVT1-216ENST00000523068 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
PVT1-216ENST00000523068 FRMPD3Q5JV73 1810 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 STRNO43815 780 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
PVT1-216ENST00000523068 RASA1P20936 1047 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 PDE1AP54750 535 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 PDE4BQ07343 736 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 TRIM32Q13049 653 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 GRB14Q14449 540 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
PVT1-216ENST00000523068 RAD21O60216 631 aa12.98□□□□□ -0.33
PVT1-216ENST00000523068 HOXC6P09630 235 aa12.98□□□□□ -0.33
PVT1-216ENST00000523068 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
PVT1-216ENST00000523068 PLS1Q14651 629 aa12.98□□□□□ -0.33
PVT1-216ENST00000523068 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
PVT1-216ENST00000523068 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
PVT1-216ENST00000523068 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
PVT1-216ENST00000523068 MOV10L1Q9BXT6 1211 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms