RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 FEZ1Q99689 392 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 ZNF157P51786 506 aaPredicted RBP19.06■□□□□ 0.64
LSM1-204ENST00000522515 BACE1P56817 501 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 DGKZQ13574 1117 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 RGMBQ6NW40 437 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 WNK4Q96J92 1243 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 KIAA1683Q9H0B3 1180 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 CREBZFQ9NS37 354 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 ANKRD1Q15327 319 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 KIAA1755Q5JYT7 1200 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 APOA5Q6Q788 366 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 RASGRP2Q7LDG7 609 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 ZNF654Q8IZM8 581 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 CHMP4CQ96CF2 233 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 MYL10Q9BUA6 226 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 VCPKMTQ9H867 229 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 SYNPO2Q9UMS6 1093 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
LSM1-204ENST00000522515 F5H6K3 240 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 RAD21O60216 631 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 EVCP57679 992 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 KLRC3Q07444 240 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 TROAPQ12815 778 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 MKRN3Q13064 507 aaKnown RBP19.04■□□□□ 0.64
LSM1-204ENST00000522515 RAB11FIP4Q86YS3 637 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 RASAL3Q86YV0 1011 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 HHIPL1Q96JK4 782 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 EMILIN3Q9NT22 766 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 TPCN1Q9ULQ1 816 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 KCNH4Q9UQ05 1017 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 SLC12A7Q9Y666 1083 aa19.04■□□□□ 0.64
LSM1-204ENST00000522515 HMGCS2P54868 508 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 SPRYD7Q5W111 196 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 CATIPQ7Z7H3 387 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 SPICE1Q8N0Z3 855 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 GMCL1P1Q8NEA9 526 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 GOPCQ9HD26 462 aa19.03■□□□□ 0.64
LSM1-204ENST00000522515 NAP1L2Q9ULW6 460 aaPredicted RBP19.03■□□□□ 0.64
LSM1-204ENST00000522515 C19orf81C9J6K1 198 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 CXCL11O14625 94 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 NDUFB10O96000 172 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 ZBTB48P10074 688 aaPredicted RBP19.02■□□□□ 0.64
LSM1-204ENST00000522515 RXRAP19793 462 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 SH3D19Q5HYK7 790 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 SLFN13Q68D06 897 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 NUP133Q8WUM0 1156 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 PTPRFP10586 1907 aa19.02■□□□□ 0.64
LSM1-204ENST00000522515 DDAH1O94760 285 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 SLC10A3P09131 477 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 PDHBP11177 359 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 PDIA3P30101 505 aaKnown RBP19.02■□□□□ 0.63
LSM1-204ENST00000522515 USP14P54578 494 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 USP17L2Q6R6M4 530 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 SYNE3Q6ZMZ3 975 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 MICU3Q86XE3 530 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 LIMCH1Q9UPQ0 1083 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 HPS5Q9UPZ3 1129 aa19.02■□□□□ 0.63
LSM1-204ENST00000522515 A0A0G2JLL6 359 aaPredicted RBP19.01■□□□□ 0.63
LSM1-204ENST00000522515 RASSF10A6NK89 507 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 GOLGA8BA8MQT2 603 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 FAM155AB1AL88 458 aaPredicted RBP19.01■□□□□ 0.63
LSM1-204ENST00000522515 ZBTB43O43298 467 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 LARGE1O95461 756 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 SNHG28P0DPA3 235 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 HTRA3P83110 453 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 PRRT2Q7Z6L0 340 aaPredicted RBP19.01■□□□□ 0.63
LSM1-204ENST00000522515 CCDC144CPQ8IYA2 1237 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 ZNF274Q96GC6 653 aaPredicted RBP19.01■□□□□ 0.63
LSM1-204ENST00000522515 MS4A4AQ96JQ5 239 aa19.01■□□□□ 0.63
LSM1-204ENST00000522515 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
LSM1-204ENST00000522515 STK3Q13188 491 aa19■□□□□ 0.63
LSM1-204ENST00000522515 SNAPC2Q13487 334 aa19■□□□□ 0.63
LSM1-204ENST00000522515 ME3Q16798 604 aa19■□□□□ 0.63
LSM1-204ENST00000522515 DEFB115Q30KQ5 88 aa19■□□□□ 0.63
LSM1-204ENST00000522515 CYP4F22Q6NT55 531 aa19■□□□□ 0.63
LSM1-204ENST00000522515 PAXIP1Q6ZW49 1069 aaPredicted RBP19■□□□□ 0.63
LSM1-204ENST00000522515 LPAR1Q92633 364 aa19■□□□□ 0.63
LSM1-204ENST00000522515 CCDC102AQ96A19 550 aa19■□□□□ 0.63
LSM1-204ENST00000522515 C12orf42Q96LP6 360 aa19■□□□□ 0.63
LSM1-204ENST00000522515 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
LSM1-204ENST00000522515 CALM1P0DP23 149 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 CALM2P0DP24 149 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 CALM3P0DP25 149 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 VCAM1P19320 739 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 SLC1A4P43007 532 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 MOGSQ13724 837 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 GMCL1Q96IK5 515 aa18.99■□□□□ 0.63
LSM1-204ENST00000522515 FRMPD2Q68DX3 1309 aaPredicted RBP18.98■□□□□ 0.63
LSM1-204ENST00000522515 GOLGA8AA7E2F4 631 aa18.98■□□□□ 0.63
LSM1-204ENST00000522515 GOLGA8HP0CJ92 632 aa18.98■□□□□ 0.63
LSM1-204ENST00000522515 MCM2P49736 904 aa18.98■□□□□ 0.63
LSM1-204ENST00000522515 METAP2P50579 478 aaKnown RBP eCLIP18.98■□□□□ 0.63
LSM1-204ENST00000522515 GTF2A2P52657 109 aa18.98■□□□□ 0.63
LSM1-204ENST00000522515 RCAN1P53805 252 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms