RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CCDC69A6NI79 296 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 APOBRQ0VD83 1088 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 MTMR2Q13614 643 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 ZYXQ15942 572 aaKnown RBP28.31■■■□□ 2.12
PVT1-212ENST00000521951 SPRYD7Q5W111 196 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 RASAL3Q86YV0 1011 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 IL27Q8NEV9 243 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 SYNPO2Q9UMS6 1093 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 KCNH4Q9UQ05 1017 aa28.31■■■□□ 2.12
PVT1-212ENST00000521951 PTPRFP10586 1907 aa28.3■■■□□ 2.12
PVT1-212ENST00000521951 CXCL11O14625 94 aa28.3■■■□□ 2.12
PVT1-212ENST00000521951 LARP6Q9BRS8 491 aaKnown RBP28.3■■■□□ 2.12
PVT1-212ENST00000521951 BRPF3Q9ULD4 1205 aa28.3■■■□□ 2.12
PVT1-212ENST00000521951 C19orf81C9J6K1 198 aa28.29■■■□□ 2.12
PVT1-212ENST00000521951 ANKRD1Q15327 319 aa28.29■■■□□ 2.12
PVT1-212ENST00000521951 VCPKMTQ9H867 229 aa28.29■■■□□ 2.12
PVT1-212ENST00000521951 F5H6K3 240 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 ST18O60284 1047 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 ZBTB48P10074 688 aaPredicted RBP28.28■■■□□ 2.12
PVT1-212ENST00000521951 USP14P54578 494 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 KLRC3Q07444 240 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 MKRN3Q13064 507 aaKnown RBP28.28■■■□□ 2.12
PVT1-212ENST00000521951 KIAA1755Q5JYT7 1200 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 ZNF654Q8IZM8 581 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 GOPCQ9HD26 462 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 KLF18A0A0U1RQI7 1052 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 SLC10A3P09131 477 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 HMGCS2P54868 508 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 EVCP57679 992 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 DGKZQ13574 1117 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 SH3D19Q5HYK7 790 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 USP17L2Q6R6M4 530 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 CATIPQ7Z7H3 387 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 GMCL1P1Q8NEA9 526 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 EMILIN3Q9NT22 766 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 MTMR7Q9Y216 660 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 SLC12A7Q9Y666 1083 aa28.28■■■□□ 2.12
PVT1-212ENST00000521951 RASSF10A6NK89 507 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 RAD21O60216 631 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 C1QTNF8P60827 252 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 DEFB115Q30KQ5 88 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 SLFN13Q68D06 897 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 APOA5Q6Q788 366 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 NOL8Q76FK4 1167 aaKnown RBP28.27■■■□□ 2.12
PVT1-212ENST00000521951 CCDC102AQ96A19 550 aa28.27■■■□□ 2.12
PVT1-212ENST00000521951 A0A0G2JLL6 359 aaPredicted RBP28.26■■■□□ 2.11
PVT1-212ENST00000521951 FAM155AB1AL88 458 aaPredicted RBP28.26■■■□□ 2.11
PVT1-212ENST00000521951 NDUFB10O96000 172 aa28.26■■■□□ 2.11
PVT1-212ENST00000521951 TROAPQ12815 778 aa28.26■■■□□ 2.11
PVT1-212ENST00000521951 PRRT2Q7Z6L0 340 aaPredicted RBP28.26■■■□□ 2.11
PVT1-212ENST00000521951 CHMP4CQ96CF2 233 aa28.26■■■□□ 2.11
PVT1-212ENST00000521951 MYL10Q9BUA6 226 aa28.26■■■□□ 2.11
PVT1-212ENST00000521951 CD2BP2O95400 341 aaKnown RBP28.25■■■□□ 2.11
PVT1-212ENST00000521951 SNAPC2Q13487 334 aa28.25■■■□□ 2.11
PVT1-212ENST00000521951 SYNE3Q6ZMZ3 975 aa28.25■■■□□ 2.11
PVT1-212ENST00000521951 RASGRP2Q7LDG7 609 aa28.25■■■□□ 2.11
PVT1-212ENST00000521951 SPICE1Q8N0Z3 855 aa28.25■■■□□ 2.11
PVT1-212ENST00000521951 TPCN1Q9ULQ1 816 aa28.25■■■□□ 2.11
PVT1-212ENST00000521951 NAP1L2Q9ULW6 460 aaPredicted RBP28.25■■■□□ 2.11
PVT1-212ENST00000521951 GTF2A2P52657 109 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 CYP4F22Q6NT55 531 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 PAXIP1Q6ZW49 1069 aaPredicted RBP28.24■■■□□ 2.11
PVT1-212ENST00000521951 RAB11FIP4Q86YS3 637 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 MS4A4AQ96JQ5 239 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 C12orf42Q96LP6 360 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 TMOD4Q9NZQ9 345 aa28.24■■■□□ 2.11
PVT1-212ENST00000521951 DDAH1O94760 285 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 PDHBP11177 359 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 HTRA3P83110 453 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 NUP133Q8WUM0 1156 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 LPAR1Q92633 364 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 ZNF274Q96GC6 653 aaPredicted RBP28.23■■■□□ 2.11
PVT1-212ENST00000521951 ZBTB43O43298 467 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 SNHG28P0DPA3 235 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 RXRAP19793 462 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 PDIA3P30101 505 aaKnown RBP28.23■■■□□ 2.11
PVT1-212ENST00000521951 DCAF4Q8WV16 495 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 GMCL1Q96IK5 515 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 LIMCH1Q9UPQ0 1083 aa28.23■■■□□ 2.11
PVT1-212ENST00000521951 CALM1P0DP23 149 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 CALM2P0DP24 149 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 CALM3P0DP25 149 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 MOGSQ13724 837 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 GADL1Q6ZQY3 521 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 MICU3Q86XE3 530 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 NUP88Q99567 741 aaPredicted RBP28.22■■■□□ 2.11
PVT1-212ENST00000521951 HPS5Q9UPZ3 1129 aa28.22■■■□□ 2.11
PVT1-212ENST00000521951 GOLGA8BA8MQT2 603 aa28.21■■■□□ 2.11
PVT1-212ENST00000521951 CETPP11597 493 aa28.21■■■□□ 2.11
PVT1-212ENST00000521951 SLC1A4P43007 532 aa28.21■■■□□ 2.11
PVT1-212ENST00000521951 PROCA1Q8NCQ7 364 aaPredicted RBP28.21■■■□□ 2.11
PVT1-212ENST00000521951 MAP3K14Q99558 947 aa28.21■■■□□ 2.11
PVT1-212ENST00000521951 LOC285556D6RIA3 1793 aa28.21■■■□□ 2.11
PVT1-212ENST00000521951 HSPA6P17066 643 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 VCAM1P19320 739 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 RCAN1P53805 252 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 GRM1Q13255 1194 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 GRM4Q14833 912 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 FASTKD5Q7L8L6 764 aaKnown RBP28.2■■■□□ 2.1
PVT1-212ENST00000521951 CCDC144CPQ8IYA2 1237 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms