RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 KCNQ2O43526 872 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 HTR3BO95264 441 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 FAM153BP0C7A2 387 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 AP3B2Q13367 1082 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 BRINP3Q76B58 766 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 THNSL2Q86YJ6 484 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 FMNL3Q8IVF7 1028 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 NINJ1Q92982 152 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 SPATA9Q9BWV2 254 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 ATP8A1Q9Y2Q0 1164 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 RIPOR2Q9Y4F9 1068 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 C1orf167Q5SNV9 1468 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 ADCY3O60266 1144 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 SELPP16109 830 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 CNGA1P29973 690 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 CDKN1CP49918 316 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-215ENST00000521798 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 ZC3H12BQ5HYM0 836 aaKnown RBP9.42□□□□□ -0.9
SPIDR-215ENST00000521798 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-215ENST00000521798 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 CHAC2Q8WUX2 184 aa9.42□□□□□ -0.9
SPIDR-215ENST00000521798 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
SPIDR-215ENST00000521798 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 GFRA2O00451 464 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 MAN1A2O60476 641 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 GSTP1P09211 210 aaKnown RBP9.41□□□□□ -0.9
SPIDR-215ENST00000521798 POU3F3P20264 500 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-215ENST00000521798 FGFR3P22607 806 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 STAT3P40763 770 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 CDK8P49336 464 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 SAFB2Q14151 953 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPIDR-215ENST00000521798 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 VHLLQ6RSH7 139 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 GMCL1Q96IK5 515 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 EPN3Q9H201 632 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
SPIDR-215ENST00000521798 GMIPQ9P107 970 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 POGKQ9P215 609 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 TRPM1Q7Z4N2 1603 aa9.41□□□□□ -0.9
SPIDR-215ENST00000521798 ARHGEF28Q8N1W1 1705 aaKnown RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 MAP4K4O95819 1239 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 EXOSC10Q01780 885 aaKnown RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 PTSQ03393 145 aa9.4□□□□□ -0.9
SPIDR-215ENST00000521798 SLC10A6Q3KNW5 377 aa9.4□□□□□ -0.9
SPIDR-215ENST00000521798 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
SPIDR-215ENST00000521798 UNC5AQ6ZN44 842 aa9.4□□□□□ -0.9
SPIDR-215ENST00000521798 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 LRRC47Q8N1G4 583 aaKnown RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.9
SPIDR-215ENST00000521798 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 FAM126AQ9BYI3 521 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-215ENST00000521798 AHDC1Q5TGY3 1603 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 LTBP3Q9NS15 1303 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ADGRB2O60241 1585 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 SUSD5O60279 629 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 RFPL3O75679 317 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ACRP10323 421 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 MYCLP1P12525 358 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 TBC1D8BQ0IIM8 1120 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 IKBKEQ14164 716 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ZYXQ15942 572 aaKnown RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 WIPI1Q5MNZ9 446 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 FAM35AQ86V20 835 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 PSMD1Q99460 953 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 MAGEC2Q9UBF1 373 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 PHF24Q9UPV7 400 aa9.39□□□□□ -0.91
SPIDR-215ENST00000521798 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
SPIDR-215ENST00000521798 ROCK2O75116 1388 aaKnown RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 GPRASP1Q5JY77 1395 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 A0A087X0B3 334 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 TNFRSF10CO14798 259 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 TPD52L2O43399 206 aaKnown RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 CPB1P15086 417 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 NME1P15531 152 aaKnown RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 EVA1CP58658 441 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 BRDTQ58F21 947 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
SPIDR-215ENST00000521798 ATG4CQ96DT6 458 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 SGSM3Q96HU1 749 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 REV1Q9UBZ9 1251 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
SPIDR-215ENST00000521798 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms