RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 AKAP4Q5JQC9 854 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 EEPD1Q7L9B9 569 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 FAM13CQ8NE31 585 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 SGSM3Q96HU1 749 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 EXOC2Q96KP1 924 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLC6A18Q96N87 628 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 UBL7Q96S82 380 aaPredicted RBP5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 FEZ1Q99689 392 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 RUSC1Q9BVN2 902 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 ACSS3Q9H6R3 686 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 FAM105AQ9NUU6 356 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 ACTL7BQ9Y614 415 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 CNTNAP4Q9C0A0 1308 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 FAM86C2PA6NEL3 165 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 ZNF143P52747 638 aaPredicted RBP5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 CBX2Q14781 532 aaPredicted RBP5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 NBPF12Q5TAG4 269 aaPredicted RBP5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 CYB5D2Q8WUJ1 264 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 CCDC74BQ96LY2 380 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 DPH2Q9BQC3 489 aaPredicted RBP5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 RNF208Q9H0X6 261 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 ATXN3LQ9H3M9 355 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 NOP58Q9Y2X3 529 aaKnown RBP5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 PRKAB1Q9Y478 270 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 COL4A3BPQ9Y5P4 624 aa5.03□□□□□ -1.6
HMGN1P28-201ENST00000521340 A0A087X0B3 334 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 KCNQ2O43526 872 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 DNAJC6O75061 913 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 RFPL3O75679 317 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 MED26O95402 600 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 EPHX1P07099 455 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 HCLS1P14317 486 aaPredicted RBP5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 RAG1P15918 1043 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 YARSP54577 528 aaKnown RBP5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 CYP4F3Q08477 520 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 TMEM67Q5HYA8 995 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 NUTM2GQ5VZR2 741 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 FAM214BQ7L5A3 538 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 FILIP1Q7Z7B0 1213 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 SLC51AQ86UW1 340 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 MRGPRX3Q96LB0 322 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 CLUHP3Q96NS8 147 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 HAUS7Q99871 368 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 FOXQ1Q9C009 403 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 SPC25Q9HBM1 224 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 RAD18Q9NS91 495 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 APEX2Q9UBZ4 518 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 CD2APQ9Y5K6 639 aa5.02□□□□□ -1.61
HMGN1P28-201ENST00000521340 DYNC1LI2O43237 492 aaPredicted RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ASMTLO95671 621 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 GLB1P16278 677 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 SSTR4P31391 388 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 GRIA2P42262 883 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 PREPP48147 710 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 FAM209AQ5JX71 171 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 YOD1Q5VVQ6 348 aaPredicted RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 TDRD10Q5VZ19 366 aaKnown RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 KRT26Q7Z3Y9 468 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ARMC10Q8N2F6 343 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZSWIM2Q8NEG5 633 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 EZH1Q92800 747 aaPredicted RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 OSBP2Q969R2 916 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 FAM46AQ96IP4 442 aaKnown RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 DHRS1Q96LJ7 313 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 LGR4Q9BXB1 951 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 FAM126AQ9BYI3 521 aaPredicted RBP5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 TMX1Q9H3N1 280 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 CEP131Q9UPN4 1083 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 RAXQ9Y2V3 346 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZNF451Q9Y4E5 1061 aa5.01□□□□□ -1.61
HMGN1P28-201ENST00000521340 ANKRD34BA5PLL1 514 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 TBX1O43435 398 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 RAB11FIP3O75154 756 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 SLITRK5O94991 958 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 ITGAVP06756 1048 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 C6orf222P0C671 652 aaPredicted RBP5□□□□□ -1.61
HMGN1P28-201ENST00000521340 L1CAMP32004 1257 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 TCEA2Q15560 299 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 BBS9Q3SYG4 887 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZC3H12BQ5HYM0 836 aaKnown RBP5□□□□□ -1.61
HMGN1P28-201ENST00000521340 RNF187Q5TA31 235 aaPredicted RBP5□□□□□ -1.61
HMGN1P28-201ENST00000521340 DCAF15Q66K64 600 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 CDPF1Q6NVV7 123 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 THNSL2Q86YJ6 484 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 SMYD4Q8IYR2 804 aaPredicted RBP5□□□□□ -1.61
HMGN1P28-201ENST00000521340 KCT2Q8NC54 265 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 DCAF11Q8TEB1 546 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 FBXL18Q96ME1 805 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 SLC26A8Q96RN1 970 aa5□□□□□ -1.61
HMGN1P28-201ENST00000521340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5□□□□□ -1.61
HMGN1P28-201ENST00000521340 CYP4F12Q9HCS2 524 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms