RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
TRIM35-204ENST00000521283 APPBP2Q92624 585 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 ZNF287Q9HBT7 754 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 ZBTB21Q9ULJ3 1066 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 PTPN22Q9Y2R2 807 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 FAM196BA6NMK8 535 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-204ENST00000521283 MBD4O95243 580 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-204ENST00000521283 GABPAQ06546 454 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
TRIM35-204ENST00000521283 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 ARPP21Q9UBL0 812 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-204ENST00000521283 STAP2Q9UGK3 403 aa12.23□□□□□ -0.45
TRIM35-204ENST00000521283 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
TRIM35-204ENST00000521283 BCRP11274 1271 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 CAPN2P17655 700 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 PLCD1P51178 756 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 PTPN5P54829 565 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 FCGRTP55899 365 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 PI4K2BQ8TCG2 481 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 EVI5LQ96CN4 794 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 ARMT1Q9H993 441 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 SLC4A4Q9Y6R1 1079 aa12.22□□□□□ -0.45
TRIM35-204ENST00000521283 ADGRA2Q96PE1 1338 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 GH2P01242 217 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 HMGCS2P54868 508 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 FAM110CQ1W6H9 321 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 SBK1Q52WX2 424 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 WNT2BQ93097 391 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
TRIM35-204ENST00000521283 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
TRIM35-204ENST00000521283 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.45
TRIM35-204ENST00000521283 SUPT16HQ9Y5B9 1047 aaKnown RBP12.21□□□□□ -0.45
TRIM35-204ENST00000521283 BAZ2AQ9UIF9 1905 aaKnown RBP12.21□□□□□ -0.46
TRIM35-204ENST00000521283 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 FMNL1O95466 1100 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-204ENST00000521283 SHMT1P34896 483 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 PSMC4P43686 418 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 PDE1AP54750 535 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-204ENST00000521283 MTMR2Q13614 643 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 NBR1Q14596 966 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
TRIM35-204ENST00000521283 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 FEZ1Q99689 392 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 MGAMO43451 1857 aa12.2□□□□□ -0.46
TRIM35-204ENST00000521283 GOLGA8CPA6NN73 597 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L12C9JPN9 530 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L21D6R901 530 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 GDF11O95390 407 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 SLC3A2P08195 630 aaKnown RBP12.19□□□□□ -0.46
TRIM35-204ENST00000521283 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 CYP2C8P10632 490 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
TRIM35-204ENST00000521283 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 COA7Q96BR5 231 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 SRRDQ9UH36 339 aa12.19□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 GPAA1O43292 621 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 MFAP1P55081 439 aaKnown RBP12.18□□□□□ -0.46
TRIM35-204ENST00000521283 NUCB1Q02818 461 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
TRIM35-204ENST00000521283 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms