RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 JAKMIP2Q96AA8 810 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 ERLIN2O94905 339 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 NDUFA10O95299 355 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 GGCXP38435 758 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 OR8K1Q8NGG5 319 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 SNAP23O00161 211 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 NLRP5P59047 1200 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 SPA17Q15506 151 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 TOM1L2Q6ZVM7 507 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 PROSER2Q86WR7 435 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 ZNF654Q8IZM8 581 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 FANCBQ8NB91 859 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 MED15Q96RN5 788 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 MMS19Q96T76 1030 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 TRMT112Q9UI30 125 aaKnown RBP14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 SAMM50Q9Y512 469 aa14.43□□□□□ -0.1
TRAPPC9-208ENST00000520857 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 NTRK3Q16288 839 aa14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 IQCEQ6IPM2 695 aa14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 FBXL16Q8N461 479 aa14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 ATP1A1P05023 1023 aaKnown RBP14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 GSDMAQ96QA5 445 aa14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 CYLC1P35663 651 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 POLD4Q9HCU8 107 aa14.42□□□□□ -0.1
TRAPPC9-208ENST00000520857 STAT6P42226 847 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 USP5P45974 858 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 MTIF2P46199 727 aaKnown RBP14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 GNGT1P63211 74 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 CYP27A1Q02318 531 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 C2orf54Q08AI8 447 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 PTGDRQ13258 359 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 NOC3LQ8WTT2 800 aaKnown RBP14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 NBPF3Q9H094 633 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 KRT83P78385 493 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 KIF5AQ12840 1032 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 RNF187Q5TA31 235 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 PIK3AP1Q6ZUJ8 805 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 CRACR2BQ8N4Y2 399 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 HAUS4Q9H6D7 363 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 GREM2Q9H772 168 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 GDAQ9Y2T3 454 aa14.41□□□□□ -0.1
TRAPPC9-208ENST00000520857 ERCC3P19447 782 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 TADA2BQ86TJ2 420 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 ZNF185O15231 689 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 USP14P54578 494 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 SLC4A8Q2Y0W8 1093 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 CATIPQ7Z7H3 387 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 EFCAB13Q8IY85 973 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 EHBP1Q8NDI1 1231 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 TTC26A0AVF1 554 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 NDUFAB1O14561 156 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 LIFRP42702 1097 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 SARSP49591 514 aaKnown RBP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 CORO7P57737 925 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 ANKRD18AQ8IVF6 992 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 RNF41Q9H4P4 317 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 MYO1AQ9UBC5 1043 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 BAZ2BQ9UIF8 2168 aaKnown RBP14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 PLEKHG2Q9H7P9 1386 aa14.4□□□□□ -0.1
TRAPPC9-208ENST00000520857 A0A087X0B3 334 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 TRIM49BA6NDI0 452 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 INPP5BP32019 993 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 TRIM14Q14142 442 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 SELENOOQ9BVL4 669 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 FAM237AA0A1B0GTK4 181 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 CUL4BQ13620 913 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 KCTD16Q68DU8 428 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 A0A087WUV0 522 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 UQCRFS1P1P0C7P4 283 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 SLC7A5Q01650 507 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 TBC1D8BQ0IIM8 1120 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 TCIRG1Q13488 830 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 DHX37Q8IY37 1157 aaKnown RBP14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 COG1Q8WTW3 980 aa14.39□□□□□ -0.11
TRAPPC9-208ENST00000520857 USP8P40818 1118 aa14.38□□□□□ -0.11
TRAPPC9-208ENST00000520857 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-208ENST00000520857 CCDC47Q96A33 483 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-208ENST00000520857 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
TRAPPC9-208ENST00000520857 LOC102724159A0A0B4J2E5 919 aa14.38□□□□□ -0.11
TRAPPC9-208ENST00000520857 AKR1B10O60218 316 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms