RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ZIC5Q96T25 663 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 VCPKMTQ9H867 229 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
TRAM1-203ENST00000520700 SLC45A1Q9Y2W3 748 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 CCL15-CCL14A0A0B4J2E2 113 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 PRC1O43663 620 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 AOC2O75106 756 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 HMGCS2P54868 508 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
TRAM1-203ENST00000520700 CCL15Q16663 113 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
TRAM1-203ENST00000520700 FEZ1Q99689 392 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 TMEM47Q9BQJ4 181 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 C22orf23Q9BZE7 217 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 GOPCQ9HD26 462 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 STX8Q9UNK0 236 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 TNKSO95271 1327 aa20.47■□□□□ 0.87
TRAM1-203ENST00000520700 F5H6K3 240 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 IFIT3O14879 490 aaKnown RBP20.46■□□□□ 0.87
TRAM1-203ENST00000520700 HOXA7P31268 230 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-203ENST00000520700 LIFRP42702 1097 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 KLRC3Q07444 240 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-203ENST00000520700 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 IL27Q8NEV9 243 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 PTPN18Q99952 460 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 ZKSCAN3Q9BRR0 538 aa20.46■□□□□ 0.87
TRAM1-203ENST00000520700 ERICH2A1L162 156 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 ATP2B2Q01814 1243 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 OTUD7BQ6GQQ9 843 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 IFNL1Q8IU54 200 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 THSD7BQ9C0I4 1608 aa20.45■□□□□ 0.86
TRAM1-203ENST00000520700 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
TRAM1-203ENST00000520700 ALDH1A1P00352 501 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 GRM1Q13255 1194 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 AGXT2Q9BYV1 514 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 ALDH8A1Q9H2A2 487 aaPredicted RBP20.44■□□□□ 0.86
TRAM1-203ENST00000520700 CYP46A1Q9Y6A2 500 aa20.44■□□□□ 0.86
TRAM1-203ENST00000520700 WDR46O15213 610 aaKnown RBP20.43■□□□□ 0.86
TRAM1-203ENST00000520700 CASTP20810 708 aaKnown RBP20.43■□□□□ 0.86
TRAM1-203ENST00000520700 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRAM1-203ENST00000520700 WTAPQ15007 396 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 KIAA1755Q5JYT7 1200 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
TRAM1-203ENST00000520700 CHST3Q7LGC8 479 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 LY9Q9HBG7 655 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 PTPRFP10586 1907 aa20.43■□□□□ 0.86
TRAM1-203ENST00000520700 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
TRAM1-203ENST00000520700 NDUFB10O96000 172 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 VCAM1P19320 739 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
TRAM1-203ENST00000520700 GADL1Q6ZQY3 521 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
TRAM1-203ENST00000520700 PNMA1Q8ND90 353 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 CFHR5Q9BXR6 569 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L15C9J2P7 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L13C9JLJ4 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L11C9JVI0 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L18D6R9N7 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L22D6RA61 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L17D6RBQ6 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L19D6RCP7 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L20D6RJB6 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 PLA2G6O60733 806 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 USP17L24Q0WX57 530 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 ZYXQ15942 572 aaKnown RBP20.41■□□□□ 0.86
TRAM1-203ENST00000520700 SLFN13Q68D06 897 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 FAM43AQ8N2R8 423 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 KIF2CQ99661 725 aa20.41■□□□□ 0.86
TRAM1-203ENST00000520700 LOC285556D6RIA3 1793 aa20.4■□□□□ 0.86
TRAM1-203ENST00000520700 PDHXO00330 501 aa20.4■□□□□ 0.86
TRAM1-203ENST00000520700 EVCP57679 992 aa20.4■□□□□ 0.86
TRAM1-203ENST00000520700 DGKZQ13574 1117 aa20.4■□□□□ 0.86
TRAM1-203ENST00000520700 TREML2Q5T2D2 321 aa20.4■□□□□ 0.86
TRAM1-203ENST00000520700 PDHBP11177 359 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 CPA1P15085 419 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 TROAPQ12815 778 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 RPAP3Q9H6T3 665 aaPredicted RBP20.39■□□□□ 0.85
TRAM1-203ENST00000520700 SENP2Q9HC62 589 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 GPHNQ9NQX3 736 aaPredicted RBP20.39■□□□□ 0.85
TRAM1-203ENST00000520700 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 PNMA3Q9UL41 463 aa20.39■□□□□ 0.85
TRAM1-203ENST00000520700 MYH4Q9Y623 1939 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms