RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TMEM179Q6ZVK1 233 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 RAB11FIP4Q86YS3 637 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
VAPB-206ENST00000520497 MAP3K14Q99558 947 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 TMEM47Q9BQJ4 181 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 ANP32EQ9BTT0 268 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 KAT14Q9H8E8 782 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 NAP1L2Q9ULW6 460 aaPredicted RBP9.95□□□□□ -0.82
VAPB-206ENST00000520497 STX8Q9UNK0 236 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 SMC3Q9UQE7 1217 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 KIF3AQ9Y496 699 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 LOC285556D6RIA3 1793 aa9.95□□□□□ -0.82
VAPB-206ENST00000520497 COL11A1P12107 1806 aaPredicted RBP9.95□□□□□ -0.82
VAPB-206ENST00000520497 PTPDC1A2A3K4 754 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 PHF20L1A8MW92 1017 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 DHX16O60231 1041 aaKnown RBP9.94□□□□□ -0.82
VAPB-206ENST00000520497 GDF11O95390 407 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 TTLL1O95922 423 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 CALM1P0DP23 149 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 CALM2P0DP24 149 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 CALM3P0DP25 149 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 TOP1P11387 765 aaKnown RBP9.94□□□□□ -0.82
VAPB-206ENST00000520497 IFNAR1P17181 557 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 ADD1P35611 737 aaKnown RBP9.94□□□□□ -0.82
VAPB-206ENST00000520497 CAP2P40123 477 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 RTN1Q16799 776 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 ABCB5Q2M3G0 1257 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
VAPB-206ENST00000520497 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 CLEC10AQ8IUN9 316 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 FANCBQ8NB91 859 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
VAPB-206ENST00000520497 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 KANSL2Q9H9L4 492 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 NYAP2Q9P242 653 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
VAPB-206ENST00000520497 STK36Q9NRP7 1315 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 MPHOSPH10O00566 681 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 DTNBO60941 627 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 GH2P01242 217 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 FDPSP14324 419 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 HMGN5P82970 282 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 FUT2Q10981 343 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 PKP1Q13835 747 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 GRM4Q14833 912 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 SEPT2Q15019 361 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 MIGA2Q7L4E1 593 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 SIAH1Q8IUQ4 282 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 NUP133Q8WUM0 1156 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 MKL1Q969V6 931 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 DCPSQ96C86 337 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 CABP5Q9NP86 173 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 SYNPO2Q9UMS6 1093 aa9.93□□□□□ -0.82
VAPB-206ENST00000520497 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
VAPB-206ENST00000520497 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 CPLX1O14810 134 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 CDKL5O76039 1030 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 PDCP20941 246 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 VEGFBP49765 207 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 ICA1Q05084 483 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 RAB3GAP1Q15042 981 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 CPLX2Q6PUV4 134 aaKnown RBP9.92□□□□□ -0.82
VAPB-206ENST00000520497 TMTC3Q6ZXV5 915 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 NBPF11Q86T75 865 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 PNMA8AQ86V59 439 aaPredicted RBP9.92□□□□□ -0.82
VAPB-206ENST00000520497 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
VAPB-206ENST00000520497 ZNF341Q9BYN7 854 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 CLIP2Q9UDT6 1046 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 MAD2L2Q9UI95 211 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 ZDHHC9Q9Y397 364 aa9.92□□□□□ -0.82
VAPB-206ENST00000520497 WDR33Q9C0J8 1336 aaKnown RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 PALM3A6NDB9 673 aaPredicted RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 ADM5C9JUS6 153 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 TRAF5O00463 557 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 FOXN1O15353 648 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 PLEKHA8P1O95397 391 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 BRD1O95696 1058 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 ASNSP08243 561 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 PDHBP11177 359 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 EEF2P13639 858 aaKnown RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 SYT1P21579 422 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 KIF5BP33176 963 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 NBR1Q14596 966 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 PRAMEF18Q5VWM3 479 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms