RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
SQLE-204ENST00000520493 PRDM7Q9NQW5 492 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 SEMA3GQ9NS98 782 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 CNTNAP4Q9C0A0 1308 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 UNCXA6NJT0 531 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 HTR3BO95264 441 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 KRT1P04264 644 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 EIF4A3P38919 411 aaKnown RBP6.59□□□□□ -1.35
SQLE-204ENST00000520493 TNK2Q07912 1038 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 MRPL58Q14197 206 aaKnown RBP6.59□□□□□ -1.35
SQLE-204ENST00000520493 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 TMPRSS7Q7RTY8 843 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 PHACTR4Q8IZ21 702 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 UBE2FQ969M7 185 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 ZSWIM5Q9P217 1185 aa6.59□□□□□ -1.35
SQLE-204ENST00000520493 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.58□□□□□ -1.36
SQLE-204ENST00000520493 TLR3O15455 904 aaKnown RBP6.58□□□□□ -1.36
SQLE-204ENST00000520493 PSPNO60542 156 aa6.58□□□□□ -1.36
SQLE-204ENST00000520493 MRRFQ96E11 262 aaKnown RBP6.58□□□□□ -1.36
SQLE-204ENST00000520493 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
SQLE-204ENST00000520493 IGSF5Q9NSI5 407 aa6.58□□□□□ -1.36
SQLE-204ENST00000520493 GPATCH2Q9NW75 528 aa6.58□□□□□ -1.36
SQLE-204ENST00000520493 UPK3BL1B0FP48 263 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 UPK3BL2E5RIL1 263 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 AFMP43652 599 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 RNF141Q8WVD5 230 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 LRRC3Q9BY71 257 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 COPRSQ9NQ92 184 aa6.57□□□□□ -1.36
SQLE-204ENST00000520493 POLR3KQ9Y2Y1 108 aaPredicted RBP6.57□□□□□ -1.36
SQLE-204ENST00000520493 GARTP22102 1010 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 GBP1P32455 592 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 CIAPIN1Q6FI81 312 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 FBXO27Q8NI29 283 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 PPP1R13LQ8WUF5 828 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 ZNF296Q8WUU4 475 aaPredicted RBP6.56□□□□□ -1.36
SQLE-204ENST00000520493 SYTL4Q96C24 671 aaPredicted RBP6.56□□□□□ -1.36
SQLE-204ENST00000520493 ALPK1Q96QP1 1244 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 ASPNQ9BXN1 380 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 KCNQ5Q9NR82 932 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 CTNND2Q9UQB3 1225 aa6.56□□□□□ -1.36
SQLE-204ENST00000520493 RAC2P15153 192 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 RAG1P15918 1043 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 FYB2Q5VWT5 728 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 DTWD2Q8NBA8 298 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 ASCC2Q9H1I8 757 aaPredicted RBP6.55□□□□□ -1.36
SQLE-204ENST00000520493 SLAMF8Q9P0V8 285 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 GMIPQ9P107 970 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 KIAA1522Q9P206 1035 aaPredicted RBP6.55□□□□□ -1.36
SQLE-204ENST00000520493 PCDHB14Q9Y5E9 798 aa6.55□□□□□ -1.36
SQLE-204ENST00000520493 CHURC1-FNTBB4DL54 471 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 FOXD2O60548 495 aaPredicted RBP6.54□□□□□ -1.36
SQLE-204ENST00000520493 TMEM253P0C7T8 217 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 TPP2P29144 1249 aaPredicted RBP6.54□□□□□ -1.36
SQLE-204ENST00000520493 GDNFP39905 211 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 RNF4P78317 190 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 APOBRQ0VD83 1088 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 KCNA10Q16322 511 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 CREG2Q8IUH2 290 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 Q96M66 194 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 KREMEN1Q96MU8 473 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 GPR62Q9BZJ7 368 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 BRMS1Q9HCU9 246 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 DUSP13Q9UII6 198 aa6.54□□□□□ -1.36
SQLE-204ENST00000520493 GREM1O60565 184 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 LTKP29376 864 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 ZNF76P36508 570 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 ZNF165P49910 485 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
SQLE-204ENST00000520493 KIRREL1Q96J84 757 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 DIRC2Q96SL1 478 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 KIF2CQ99661 725 aa6.53□□□□□ -1.36
SQLE-204ENST00000520493 RGS13O14921 159 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 ATE1O95260 518 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 GLI1P08151 1106 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 MCM4P33991 863 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 CLEC16AQ2KHT3 1053 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 SEZ6Q53EL9 994 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 ARSHQ5FYA8 562 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 TMEM67Q5HYA8 995 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 GGNQ86UU5 652 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 KIAA0825Q8IV33 1275 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 REXO1Q8N1G1 1221 aaKnown RBP6.52□□□□□ -1.37
SQLE-204ENST00000520493 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
SQLE-204ENST00000520493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.52□□□□□ -1.37
SQLE-204ENST00000520493 DUSP15Q9H1R2 295 aaPredicted RBP6.52□□□□□ -1.37
SQLE-204ENST00000520493 ADAMTS1Q9UHI8 967 aa6.52□□□□□ -1.37
SQLE-204ENST00000520493 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 ESR1P03372 595 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
SQLE-204ENST00000520493 ATG14Q6ZNE5 492 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 GK5Q6ZS86 529 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms