RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KCNH4Q9UQ05 1017 aa20.85■□□□□ 0.93
SDC2-205ENST00000520233 PHIPQ8WWQ0 1821 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 TRIM75PA6NK02 468 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 C19orf81C9J6K1 198 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 CXCL11O14625 94 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 IRF6O14896 467 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 GJA5P36382 358 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 ZNF157P51786 506 aaPredicted RBP20.84■□□□□ 0.93
SDC2-205ENST00000520233 USP14P54578 494 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 BACE1P56817 501 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 CATIPQ7Z7H3 387 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 GOPCQ9HD26 462 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 SLC12A7Q9Y666 1083 aa20.84■□□□□ 0.93
SDC2-205ENST00000520233 KLF18A0A0U1RQI7 1052 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 ZBTB48P10074 688 aaPredicted RBP20.83■□□□□ 0.93
SDC2-205ENST00000520233 MTMR2Q13614 643 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 SH3D19Q5HYK7 790 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 SPRYD7Q5W111 196 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 APOA5Q6Q788 366 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 SYNE3Q6ZMZ3 975 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 RASAL3Q86YV0 1011 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 ZNF654Q8IZM8 581 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 VCPKMTQ9H867 229 aa20.83■□□□□ 0.93
SDC2-205ENST00000520233 F5H6K3 240 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 DDAH1O94760 285 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 MCM2P49736 904 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 RCAN1P53805 252 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 KLRC3Q07444 240 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 USP17L2Q6R6M4 530 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 CCDC102AQ96A19 550 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 C12orf42Q96LP6 360 aa20.82■□□□□ 0.92
SDC2-205ENST00000520233 MYH4Q9Y623 1939 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 A0A0G2JLL6 359 aaPredicted RBP20.81■□□□□ 0.92
SDC2-205ENST00000520233 SLC10A3P09131 477 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 CALM1P0DP23 149 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 CALM2P0DP24 149 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 CALM3P0DP25 149 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 TROAPQ12815 778 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 SNAPC2Q13487 334 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 ZYXQ15942 572 aaKnown RBP20.81■□□□□ 0.92
SDC2-205ENST00000520233 SLFN13Q68D06 897 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 PRRT2Q7Z6L0 340 aaPredicted RBP20.81■□□□□ 0.92
SDC2-205ENST00000520233 LPAR1Q92633 364 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
SDC2-205ENST00000520233 MAP3K14Q99558 947 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 EMILIN3Q9NT22 766 aa20.81■□□□□ 0.92
SDC2-205ENST00000520233 RASSF10A6NK89 507 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 CD2BP2O95400 341 aaKnown RBP20.8■□□□□ 0.92
SDC2-205ENST00000520233 NDUFB10O96000 172 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 SNHG28P0DPA3 235 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
SDC2-205ENST00000520233 HMGCS2P54868 508 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 DCAF4Q8WV16 495 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 GMCL1Q96IK5 515 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
SDC2-205ENST00000520233 TMOD4Q9NZQ9 345 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 TPCN1Q9ULQ1 816 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 LIMCH1Q9UPQ0 1083 aa20.8■□□□□ 0.92
SDC2-205ENST00000520233 GOLGA8BA8MQT2 603 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 ZBTB43O43298 467 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 RAD21O60216 631 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 PDHBP11177 359 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 GTF2A2P52657 109 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 KIAA1755Q5JYT7 1200 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
SDC2-205ENST00000520233 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 SNX21Q969T3 373 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 ZSCAN31Q96LW9 406 aaPredicted RBP20.79■□□□□ 0.92
SDC2-205ENST00000520233 MYL10Q9BUA6 226 aa20.79■□□□□ 0.92
SDC2-205ENST00000520233 NAP1L2Q9ULW6 460 aaPredicted RBP20.79■□□□□ 0.92
SDC2-205ENST00000520233 FAM155AB1AL88 458 aaPredicted RBP20.78■□□□□ 0.92
SDC2-205ENST00000520233 GRM4Q14833 912 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 FASTKD5Q7L8L6 764 aaKnown RBP20.78■□□□□ 0.92
SDC2-205ENST00000520233 MICU3Q86XE3 530 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 SPICE1Q8N0Z3 855 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 PROCA1Q8NCQ7 364 aaPredicted RBP20.78■□□□□ 0.92
SDC2-205ENST00000520233 MS4A4AQ96JQ5 239 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 MTMR7Q9Y216 660 aa20.78■□□□□ 0.92
SDC2-205ENST00000520233 NID2Q14112 1375 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 WDR46O15213 610 aaKnown RBP20.77■□□□□ 0.92
SDC2-205ENST00000520233 CETPP11597 493 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 SLC1A4P43007 532 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 MKRN3Q13064 507 aaKnown RBP20.77■□□□□ 0.92
SDC2-205ENST00000520233 DGKZQ13574 1117 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 PPP2R5BQ15173 497 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 RAB11FIP4Q86YS3 637 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 FANCBQ8NB91 859 aa20.77■□□□□ 0.92
SDC2-205ENST00000520233 CTCFLQ8NI51 663 aaPredicted RBP20.77■□□□□ 0.92
SDC2-205ENST00000520233 GOLGA8AA7E2F4 631 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 PARP1P09874 1014 aaKnown RBP20.76■□□□□ 0.91
SDC2-205ENST00000520233 BMP3P12645 472 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 VCAM1P19320 739 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 RXRAP19793 462 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 KIF5BP33176 963 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms