RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ZCRB1Q8TBF4 217 aaKnown RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 ZNF587Q96SQ5 575 aaPredicted RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 LLPHQ9BRT6 129 aaKnown RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 FSD1Q9BTV5 496 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 ISCA1Q9BUE6 129 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 DSCC1Q9BVC3 393 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 PDCL3Q9H2J4 239 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 BOLA2Q9H3K6 86 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 HELLSQ9NRZ9 838 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 TPCN1Q9ULQ1 816 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 DISP2A7MBM2 1401 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 ARAP2Q8WZ64 1704 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 RREB1Q92766 1687 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 A0A087WZG4 1122 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 SFI1A8K8P3 1242 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 USP17L5A8MUK1 530 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 EML1O00423 815 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 OFD1O75665 1012 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 TPM2P07951 284 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 SPATA31C1P0DKV0 1188 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 MYL6BP14649 208 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 TFCP2Q12800 502 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 MCMDC2Q4G0Z9 681 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 PRRT3Q5FWE3 981 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 ZMYM1Q5SVZ6 1142 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 RBM43Q6ZSC3 357 aaKnown RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 MTERF4Q7Z6M4 381 aaKnown RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 ZNF589Q86UQ0 364 aaPredicted RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 CCDC83Q8IWF9 413 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 TPCN2Q8NHX9 752 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 SMARCC2Q8TAQ2 1214 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 GTF3C6Q969F1 213 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 CHAMP1Q96JM3 812 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 CWC25Q9NXE8 425 aaPredicted RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 CCDC39Q9UFE4 941 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 ZKSCAN5Q9Y2L8 839 aa5.97□□□□□ -1.45
SDC2-204ENST00000519914 COL14A1Q05707 1796 aaKnown RBP5.97□□□□□ -1.45
SDC2-204ENST00000519914 COL22A1Q8NFW1 1626 aaPredicted RBP5.96□□□□□ -1.45
SDC2-204ENST00000519914 NWD2Q9ULI1 1742 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 EYA2O00167 538 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 LZTS3O60299 673 aaPredicted RBP5.96□□□□□ -1.46
SDC2-204ENST00000519914 APBA3O96018 575 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 CSF1RP07333 972 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 IL2RBP14784 551 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 EPHA4P54764 986 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 EVCP57679 992 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 TBC1D8BQ0IIM8 1120 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 ATL3Q6DD88 541 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.96□□□□□ -1.46
SDC2-204ENST00000519914 NOL8Q76FK4 1167 aaKnown RBP5.96□□□□□ -1.46
SDC2-204ENST00000519914 UBE3BQ7Z3V4 1068 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 CHMP4CQ96CF2 233 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 HSH2DQ96JZ2 352 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 ZNF512BQ96KM6 892 aaPredicted RBP5.96□□□□□ -1.46
SDC2-204ENST00000519914 CEP63Q96MT8 703 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 DBNDD2Q9BQY9 259 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 TEX13AQ9BXU3 409 aaPredicted RBP5.96□□□□□ -1.46
SDC2-204ENST00000519914 IGFLR1Q9H665 355 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 CNPY2Q9Y2B0 182 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 NUP98P52948 1817 aa5.96□□□□□ -1.46
SDC2-204ENST00000519914 CDHR2Q9BYE9 1310 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 DOCK2Q92608 1830 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 ATRNO75882 1429 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 SPDYE3A6NKU9 549 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 PFKFB2O60825 505 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 PCCAP05165 728 aaPredicted RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 CYP21A2P08686 494 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 CPA1P15085 419 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 KRT85P78386 507 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 EXOSC10Q01780 885 aaKnown RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 SPEM2Q0P670 501 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 RESTQ13127 1097 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 TCIRG1Q13488 830 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 CHRNA2Q15822 529 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 LARP1BQ659C4 914 aaKnown RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 CCDC102BQ68D86 513 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 LMBR1LQ6UX01 489 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 KLHDC4Q8TBB5 520 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 C7orf43Q8WVR3 580 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 DDX17Q92841 729 aaKnown RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 NEK1Q96PY6 1258 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 SCAND2PQ9GZW5 306 aaPredicted RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 SIL1Q9H173 461 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 TSPAN10Q9H1Z9 355 aaPredicted RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 ZSCAN16Q9H4T2 348 aaPredicted RBP5.95□□□□□ -1.46
SDC2-204ENST00000519914 KIAA1024Q9UPX6 916 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 STARD13Q9Y3M8 1113 aa5.95□□□□□ -1.46
SDC2-204ENST00000519914 WDR19Q8NEZ3 1342 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 SALL1Q9NSC2 1324 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 LAMB2P55268 1798 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 ZNF831Q5JPB2 1677 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 SIN3BO75182 1162 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 ALBP02768 609 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 ZFYP08048 801 aaPredicted RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 MSNP26038 577 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 KCNJ4P48050 445 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms