RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
CPEB4-207ENST00000519835 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
CPEB4-207ENST00000519835 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
CPEB4-207ENST00000519835 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
CPEB4-207ENST00000519835 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
CPEB4-207ENST00000519835 SLC4A4Q9Y6R1 1079 aa13.55□□□□□ -0.24
CPEB4-207ENST00000519835 RREB1Q92766 1687 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 A0A087X0B3 334 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 GPTP24298 496 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 RASGRF1Q13972 1273 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 MCM6Q14566 821 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 FAM71BQ8TC56 605 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 PHF20Q9BVI0 1012 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 VPS18Q9P253 973 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 CTNND2Q9UQB3 1225 aa13.54□□□□□ -0.24
CPEB4-207ENST00000519835 FXR1P51114 621 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPEB4-207ENST00000519835 HSP90B2PQ58FF3 399 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 RWDD2AQ9UIY3 292 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 LAMB2P55268 1798 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 KRT31Q15323 416 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 ESR2Q92731 530 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 MED4Q9NPJ6 270 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
CPEB4-207ENST00000519835 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
CPEB4-207ENST00000519835 IQSEC3Q9UPP2 1182 aaPredicted RBP13.53□□□□□ -0.24
CPEB4-207ENST00000519835 TNKSO95271 1327 aa13.53□□□□□ -0.24
CPEB4-207ENST00000519835 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 N4BP3O15049 544 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.24
CPEB4-207ENST00000519835 RPS6KA5O75582 802 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 MCM3P25205 808 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 ERVK-24P63145 666 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 PPARAQ07869 468 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 SEC23AQ15436 765 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 HLFQ16534 295 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 WDR93Q6P2C0 686 aa13.52□□□□□ -0.24
CPEB4-207ENST00000519835 CDC5LQ99459 802 aaKnown RBP13.52□□□□□ -0.24
CPEB4-207ENST00000519835 A0A0U1RQJ8 604 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 CCT6AP40227 531 aaKnown RBP13.52□□□□□ -0.25
CPEB4-207ENST00000519835 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.25
CPEB4-207ENST00000519835 PAK1Q13153 545 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 CASP8Q14790 479 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
CPEB4-207ENST00000519835 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
CPEB4-207ENST00000519835 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 RMND1Q9NWS8 449 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 VPS54Q9P1Q0 977 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 ANAPC4Q9UJX5 808 aa13.52□□□□□ -0.25
CPEB4-207ENST00000519835 LAMB1P07942 1786 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 PRKAB2O43741 272 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
CPEB4-207ENST00000519835 RHOXF2BP0C7M4 288 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 CALM1P0DP23 149 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 CALM2P0DP24 149 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 CALM3P0DP25 149 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 GYS2P54840 703 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 VSNL1P62760 191 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 ATP2C1P98194 919 aaPredicted RBP13.51□□□□□ -0.25
CPEB4-207ENST00000519835 AMPD2Q01433 879 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 TTC38Q5R3I4 469 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 CCDC148Q8NFR7 591 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 RHOXF2Q9BQY4 288 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 VIPAS39Q9H9C1 493 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 XDHP47989 1333 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 PKN1Q16512 942 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 MAP9Q49MG5 647 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 SRLQ86TD4 932 aa13.51□□□□□ -0.25
CPEB4-207ENST00000519835 SMYD4Q8IYR2 804 aaPredicted RBP13.51□□□□□ -0.25
CPEB4-207ENST00000519835 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
CPEB4-207ENST00000519835 MYO1CO00159 1063 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 E2F4Q16254 413 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 TCP11X2Q5H9J9 407 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 RRAGBQ5VZM2 374 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
CPEB4-207ENST00000519835 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 KCNJ18B7U540 433 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 CASP1P29466 404 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
CPEB4-207ENST00000519835 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
CPEB4-207ENST00000519835 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms