RNA–Protein interactions for RNA: ENST00000519339.5

TNIP1-206, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best)

Gene TNIP1, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-206ENST00000519339 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 CDC25BP30305 580 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 NPY5RQ15761 445 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 OXER1Q8TDS5 423 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
TNIP1-206ENST00000519339 KCNH3Q9ULD8 1083 aa17.59■□□□□ 0.41
TNIP1-206ENST00000519339 SNED1Q8TER0 1413 aa17.59■□□□□ 0.41
TNIP1-206ENST00000519339 PALM3A6NDB9 673 aaPredicted RBP17.58■□□□□ 0.41
TNIP1-206ENST00000519339 NLRP12P59046 1061 aa17.58■□□□□ 0.41
TNIP1-206ENST00000519339 C11orf57Q6ZUT1 292 aaPredicted RBP17.58■□□□□ 0.41
TNIP1-206ENST00000519339 FERMT2Q96AC1 680 aa17.58■□□□□ 0.41
TNIP1-206ENST00000519339 SGIP1Q9BQI5 828 aa17.58■□□□□ 0.41
TNIP1-206ENST00000519339 MAD2L2Q9UI95 211 aa17.58■□□□□ 0.41
TNIP1-206ENST00000519339 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.41
TNIP1-206ENST00000519339 MYH1P12882 1939 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 BECN2A8MW95 431 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 H0YIN7 160 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.4
TNIP1-206ENST00000519339 PLCB2Q00722 1185 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 GABPAQ06546 454 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 KANK3Q6NY19 840 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 TMEM47Q9BQJ4 181 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 SWAP70Q9UH65 585 aa17.58■□□□□ 0.4
TNIP1-206ENST00000519339 KIF13BQ9NQT8 1826 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 CHRNA5P30532 468 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 NLRP5P59047 1200 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 CCDC34Q96HJ3 373 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 SPZ1Q9BXG8 430 aa17.57■□□□□ 0.4
TNIP1-206ENST00000519339 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
TNIP1-206ENST00000519339 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
TNIP1-206ENST00000519339 ZNF75DP51815 510 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
TNIP1-206ENST00000519339 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 DAGLBQ8NCG7 672 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 MRFAP1L1Q96HT8 127 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 TTF2Q9UNY4 1162 aaKnown RBP17.56■□□□□ 0.4
TNIP1-206ENST00000519339 G3V3G9 751 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 PTGER2P43116 358 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 STRIP1Q5VSL9 837 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 CNNM3Q8NE01 707 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 TEKT1Q969V4 418 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
TNIP1-206ENST00000519339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.56■□□□□ 0.4
TNIP1-206ENST00000519339 SMTNL1A8MU46 457 aa17.55■□□□□ 0.4
TNIP1-206ENST00000519339 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■□□ 14.7
TNIP1-206ENST00000519339 IKBKBO14920 756 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
TNIP1-206ENST00000519339 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
TNIP1-206ENST00000519339 PCDHA4Q9UN74 947 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 hCG_1642624A0A1W2PR95 340 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 hCG_1984214I3L0E3 225 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 MYO1BO43795 1136 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 TPM4P67936 248 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 ATP2C1P98194 919 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-206ENST00000519339 SLC4A8Q2Y0W8 1093 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 LONRF3Q496Y0 759 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 BLIDQ8IZY5 108 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 ZNF713Q8N859 430 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-206ENST00000519339 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
TNIP1-206ENST00000519339 ZDHHC15Q96MV8 337 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 EHD4Q9H223 541 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
TNIP1-206ENST00000519339 OFD1O75665 1012 aa17.53■□□□□ 0.4
TNIP1-206ENST00000519339 MDM2Q00987 491 aaPredicted RBP17.53■□□□□ 0.4
TNIP1-206ENST00000519339 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
TNIP1-206ENST00000519339 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
TNIP1-206ENST00000519339 ARL6IP4Q66PJ3 421 aaKnown RBP17.53■□□□□ 0.4
TNIP1-206ENST00000519339 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
TNIP1-206ENST00000519339 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
TNIP1-206ENST00000519339 TRIML1Q8N9V2 468 aa17.53■□□□□ 0.4
TNIP1-206ENST00000519339 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
TNIP1-206ENST00000519339 IGKV6D-41A0A0C4DH26 115 aa17.52■□□□□ 0.4
TNIP1-206ENST00000519339 M0R2N6 131 aa17.52■□□□□ 0.4
TNIP1-206ENST00000519339 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
TNIP1-206ENST00000519339 APOBEC3HQ6NTF7 200 aaKnown RBP17.52■□□□□ 0.4
TNIP1-206ENST00000519339 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
TNIP1-206ENST00000519339 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.4
TNIP1-206ENST00000519339 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms