RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 C3P01024 1663 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-208ENST00000519004 CDC25AP30304 524 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 CCDC47Q96A33 483 aaKnown RBP15.18■□□□□ 0.02
PABPC1-208ENST00000519004 LRRC1Q9BTT6 524 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 A0A0G2JLW4 131 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 PI4KAP2A4QPH2 592 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 ZNF233A6NK53 670 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 DNAJC8O75937 253 aaPredicted RBP15.17■□□□□ 0.02
PABPC1-208ENST00000519004 NDUFA10O95299 355 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 CDKAL1Q5VV42 579 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 PI4KAP1Q8N8J0 262 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 CHP1Q99653 195 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 CORO1CQ9ULV4 474 aaPredicted RBP15.17■□□□□ 0.02
PABPC1-208ENST00000519004 TFR2Q9UP52 801 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 EPN1Q9Y6I3 576 aaPredicted RBP15.17■□□□□ 0.02
PABPC1-208ENST00000519004 ERICH2A1L162 156 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 FESP07332 822 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 HERVK_113P62684 666 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 BYSLQ13895 437 aaKnown RBP15.17■□□□□ 0.02
PABPC1-208ENST00000519004 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 CCDC70Q6NSX1 233 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 TAX1BP1Q86VP1 789 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 ZNF570Q96NI8 536 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
PABPC1-208ENST00000519004 E7EWF7 191 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 AHCYL1O43865 530 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 TEFQ10587 303 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 ARMC3Q5W041 872 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 IQCEQ6IPM2 695 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 TRIML1Q8N9V2 468 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-208ENST00000519004 CDC25CP30307 473 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 QPCTQ16769 361 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 CCDC181Q5TID7 509 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 CRELD2Q6UXH1 353 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-208ENST00000519004 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 BAIAP2L1Q9UHR4 511 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 RFX7Q2KHR2 1363 aa15.16■□□□□ 0.02
PABPC1-208ENST00000519004 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
PABPC1-208ENST00000519004 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 TTC39AQ5SRH9 613 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 GRAMD1CQ8IYS0 662 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 EHBP1Q8NDI1 1231 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 COQ9O75208 318 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 RTN3O95197 1032 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-208ENST00000519004 ANP32DO95626 131 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 LINGO3P0C6S8 592 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.023e-11■■■□□ 17.3
PABPC1-208ENST00000519004 ITGB3BPQ13352 177 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-208ENST00000519004 CCDC122Q5T0U0 273 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 PPP4R3AQ6IN85 833 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 TRIM58Q8NG06 486 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 PPANQ9NQ55 473 aaKnown RBP15.15■□□□□ 0.02
PABPC1-208ENST00000519004 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.15■□□□□ 0.02
PABPC1-208ENST00000519004 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
PABPC1-208ENST00000519004 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 TNFRSF8P28908 595 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 CWF19L1Q69YN2 538 aaKnown RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 GGT6Q6P531 493 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 ZNF572Q7Z3I7 529 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 CD302Q8IX05 232 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 KLHL23Q8NBE8 558 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 PIK3R5Q8WYR1 880 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 SERTAD1Q9UHV2 236 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 ARID4AP29374 1257 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 STX17P56962 302 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 GLE1Q53GS7 698 aaKnown RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 CREG2Q8IUH2 290 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 SEC16BQ96JE7 1060 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 NUP88Q99567 741 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-208ENST00000519004 HPS5Q9UPZ3 1129 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
PABPC1-208ENST00000519004 GMNCA6NCL1 334 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 PES1O00541 588 aaKnown RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 LIN7AO14910 233 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 SEMA3EO15041 775 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 PYGLP06737 847 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 GHRP10912 638 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 KRT9P35527 623 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 PPARAQ07869 468 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 CUL4BQ13620 913 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 CFAP58Q5T655 872 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 FBXL16Q8N461 479 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 C1orf131Q8NDD1 294 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms