RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 ZNF185O15231 689 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 IDH1O75874 414 aaKnown RBP11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 MCAMP43121 646 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 TICAM2Q86XR7 235 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 COG1Q8WTW3 980 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 DDX60Q8IY21 1712 aaKnown RBP11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 MRPS25P82663 173 aaKnown RBP11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 RILPL1Q5EBL4 403 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 FBXW10Q5XX13 1052 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 KANK3Q6NY19 840 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 TRAPPC11Q7Z392 1133 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 EPN1Q9Y6I3 576 aaPredicted RBP11.02□□□□□ -0.65
ARFGEF1-203ENST00000518230 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 IRAK1P51617 712 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 MMS22LQ6ZRQ5 1243 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 VIPAS39Q9H9C1 493 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 MYO5AQ9Y4I1 1855 aaKnown RBP11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 WNT7AO00755 349 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 NDUFA10O95299 355 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 TUBBP07437 444 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 CTCFLQ8NI51 663 aaPredicted RBP11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 CCDC51Q96ER9 411 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 SAR1BQ9Y6B6 198 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
ARFGEF1-203ENST00000518230 CIAO1O76071 339 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ERLIN2O94905 339 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 CPP00450 1065 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 IFNAR1P17181 557 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 FECHP22830 423 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ADD2P35612 726 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 RRAGBQ5VZM2 374 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SGMS1Q86VZ5 419 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SELENOOQ9BVL4 669 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 PIH1D3Q9NQM4 214 aaKnown RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 MYO1AQ9UBC5 1043 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SAMM50Q9Y512 469 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 FAM169AQ9Y6X4 670 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ABCA3Q99758 1704 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ZNF532Q9HCE3 1301 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 PDE2AO00408 941 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 COPB1P53618 953 aaKnown RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 CCDC122Q5T0U0 273 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 FKBP15Q5T1M5 1219 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 FAM76AQ8TAV0 307 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 NUP133Q8WUM0 1156 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 PIGBQ92521 554 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 MYCBPQ99417 103 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 FOXP1Q9H334 677 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 GNL3LQ9NVN8 582 aaKnown RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SHANK3Q9BYB0 1731 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 LAMB4A4D0S4 1761 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 TTC26A0AVF1 554 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 GOLGA6CA6NDK9 693 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 PES1O00541 588 aaKnown RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 GOLGA6DP0CG33 693 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 UBXN1Q04323 297 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 MAP9Q49MG5 647 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 CCNI2Q6ZMN8 369 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SYNE4Q8N205 404 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 BCAS4Q8TDM0 211 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 SHISA4Q96DD7 197 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 GOLGA6AQ9NYA3 693 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 TMOD3Q9NYL9 352 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 VPS54Q9P1Q0 977 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-203ENST00000518230 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
ARFGEF1-203ENST00000518230 MAP3K15Q6ZN16 1313 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 HERVK_113P62684 666 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 C2orf54Q08AI8 447 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 EZH2Q15910 746 aaKnown RBP10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 SH3RF1Q7Z6J0 888 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 SUGP1Q8IWZ8 645 aaKnown RBP10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 FAM89AQ96GI7 184 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.653e-9■■■□□ 18.9
ARFGEF1-203ENST00000518230 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 ITIH6Q6UXX5 1313 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 PSMD14O00487 310 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 EBAG9O00559 213 aa10.99□□□□□ -0.65
ARFGEF1-203ENST00000518230 PRDM1O75626 825 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms