RNA–Protein interactions for RNA: ENST00000518228.1

HACE1-207, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best)

Gene HACE1, Length 2,663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-207ENST00000518228 ZFATQ9P243 1243 aa3.59□□□□□ -1.83
HACE1-207ENST00000518228 MSRB2Q9Y3D2 182 aa3.59□□□□□ -1.83
HACE1-207ENST00000518228 MAP3K19Q56UN5 1328 aa3.59□□□□□ -1.84
HACE1-207ENST00000518228 DISP2A7MBM2 1401 aa3.59□□□□□ -1.84
HACE1-207ENST00000518228 A0A096LPE4 126 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 A0A1W2PPZ6 126 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 ENC1O14682 589 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 DNAJC6O75061 913 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 CELA3AP09093 270 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 U2AF1L5P0DN76 240 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 TFE3P19532 575 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 NFKB1P19838 968 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 SMCPP49901 116 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 ZNF165P49910 485 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 EIF6P56537 245 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 U2AF1Q01081 240 aaKnown RBP eCLIP3.58□□□□□ -1.84
HACE1-207ENST00000518228 HDAC1Q13547 482 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 MPP2Q14168 576 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 RASA3Q14644 834 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 LRRC14Q15048 493 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 CWF19L2Q2TBE0 894 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 NME9Q86XW9 330 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 NXPE3Q969Y0 559 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 RNPC3Q96LT9 517 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 GAS2L1Q99501 681 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 TMEM39AQ9NV64 488 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 TYW1Q9NV66 732 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 UBP1Q9NZI7 540 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 MARK1Q9P0L2 795 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 DDX19BQ9UMR2 479 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 CYP8B1Q9UNU6 501 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 SUGT1Q9Y2Z0 365 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 COL4A3BPQ9Y5P4 624 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 LOC102724159A0A0B4J2E5 919 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 PDE2AO00408 941 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 APAF1O14727 1248 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 KHNYNO15037 678 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 GRIA4P48058 902 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 GIPRP48546 466 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 RARSP54136 660 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 FAM160A1Q05DH4 1040 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 SPEM2Q0P670 501 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 PWP2Q15269 919 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 ARSHQ5FYA8 562 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 FAM182BQ5T319 152 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 ZKSCAN2Q63HK3 967 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 DHX32Q7L7V1 743 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 HNRNPLLQ8WVV9 542 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 GATAD2BQ8WXI9 593 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 ANAPC16Q96DE5 110 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 GPATCH3Q96I76 525 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 CRBNQ96SW2 442 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 NUCKS1Q9H1E3 243 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 MIR1-1HGQ9H1L0 117 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 TLR6Q9Y2C9 796 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 MRVI1Q9Y6F6 885 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 PHLPP1O60346 1717 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 RGPD3A6NKT7 1758 aaPredicted RBP3.58□□□□□ -1.84
HACE1-207ENST00000518228 RGPD4Q7Z3J3 1758 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 ABCC4O15439 1325 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 ROBO1Q9Y6N7 1651 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 SHANK3Q9BYB0 1731 aa3.58□□□□□ -1.84
HACE1-207ENST00000518228 GNAT3A8MTJ3 354 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 FBXO24O75426 580 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 MAPTP10636 758 aaKnown RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 AMPHP49418 695 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 RIPK4P57078 832 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 GPLD1P80108 840 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 COL13A1Q5TAT6 717 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 RBBP8NLQ8NC74 664 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 TRPM4Q8TD43 1214 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 EMILIN2Q9BXX0 1053 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 RBSNQ9H1K0 784 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 SPC25Q9HBM1 224 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 NDFIP2Q9NV92 336 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 TNS2Q63HR2 1409 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 FANCIQ9NVI1 1328 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 FIGNL2A6NMB9 653 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 NFKBIEO00221 500 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 NME2P22392 152 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 IFRD2Q12894 506 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 RASGRF1Q13972 1273 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 INTS3Q68E01 1043 aaKnown RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 TMED8Q6PL24 325 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 DDX54Q8TDD1 881 aaKnown RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 LRRC59Q96AG4 307 aaKnown RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 TRERF1Q96PN7 1200 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 CARD10Q9BWT7 1032 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 TEX13AQ9BXU3 409 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 PBX4Q9BYU1 374 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 ACTR10Q9NZ32 417 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 BCCIPQ9P287 314 aaKnown RBP eCLIP3.57□□□□□ -1.84
HACE1-207ENST00000518228 ATXN7L1Q9ULK2 861 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.57□□□□□ -1.84
HACE1-207ENST00000518228 AOX1Q06278 1338 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 KDM2BQ8NHM5 1336 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 C5P01031 1676 aa3.57□□□□□ -1.84
HACE1-207ENST00000518228 ERVV-2B6SEH9 535 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms