RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 ANKRD1Q15327 319 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 TTF1Q15361 905 aaPredicted RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 PUM3Q15397 648 aaKnown RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 TLR1Q15399 786 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 VPS53Q5VIR6 699 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 USPL1Q5W0Q7 1092 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 CREB3L3Q68CJ9 461 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 CLEC17AQ6ZS10 378 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 UBR3Q6ZT12 1888 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 SYNE4Q8N205 404 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 C1orf216Q8TAB5 229 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 LPIN2Q92539 896 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 TNPO1Q92973 898 aaKnown RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 CDC5LQ99459 802 aaKnown RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 ALDH8A1Q9H2A2 487 aaPredicted RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 CCNL1Q9UK58 526 aaPredicted RBP6.97□□□□□ -1.29
CD47-205ENST00000517766 CYP46A1Q9Y6A2 500 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 PARP3Q9Y6F1 533 aa6.97□□□□□ -1.29
CD47-205ENST00000517766 RPAP1Q9BWH6 1393 aaPredicted RBP6.96□□□□□ -1.29
CD47-205ENST00000517766 CHD4Q14839 1912 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 H3BRB1 525 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SLC27A2O14975 620 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 TAF5LO75529 589 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SLC5A1P13866 664 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 CASTP20810 708 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 CENPCQ03188 943 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SF3B3Q15393 1217 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 SLC10A5Q5PT55 438 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SH3PXD2AQ5TCZ1 1133 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 BLOC1S2Q6QNY1 142 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 Q6ZVU0 165 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 RUFY3Q7L099 469 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 EDC3Q96F86 508 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 JAKMIP1Q96N16 626 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 TTC14Q96N46 770 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 DSCC1Q9BVC3 393 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 UPF3BQ9BZI7 483 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.3
CD47-205ENST00000517766 SAP130Q9H0E3 1048 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 SH2B1Q9NRF2 756 aaPredicted RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 PDRG1Q9NUG6 133 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
CD47-205ENST00000517766 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.96□□□□□ -1.3
CD47-205ENST00000517766 FAM177BA6PVY3 158 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 CYP2E1P05181 493 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 FGFR2P21802 821 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 IGFBP4P22692 258 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 AK2P54819 239 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
CD47-205ENST00000517766 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 FAM196AQ6ZSG2 479 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 ZNF589Q86UQ0 364 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 SETDB2Q96T68 719 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 COL25A1Q9BXS0 654 aaPredicted RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 QTRT2Q9H974 415 aaKnown RBP6.95□□□□□ -1.3
CD47-205ENST00000517766 TAF1P21675 1872 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 CCDC88AQ3V6T2 1871 aa6.95□□□□□ -1.3
CD47-205ENST00000517766 TCHHQ07283 1943 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 RPS6KB1P23443 525 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 ADORA1P30542 326 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 DEKP35659 375 aaKnown RBP6.94□□□□□ -1.3
CD47-205ENST00000517766 TRAPPC3LQ5T215 181 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 TPTE2Q6XPS3 522 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 ANKRD18AQ8IVF6 992 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 APPBP2Q92624 585 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 NLRP3Q96P20 1036 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 CTNNA3Q9UI47 895 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 HCN4Q9Y3Q4 1203 aa6.94□□□□□ -1.3
CD47-205ENST00000517766 BAG4O95429 457 aaKnown RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 HSPD1P10809 573 aaKnown RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 RFC4P35249 363 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 MCAMP43121 646 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 ZAP70P43403 619 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 CLN3Q13286 438 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 UBE3CQ15386 1083 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 MTFR1Q15390 333 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 SLC27A3Q5K4L6 730 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 TBC1D9BQ66K14 1250 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 ZGPATQ8N5A5 531 aaKnown RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
CD47-205ENST00000517766 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 SEC62Q99442 399 aaKnown RBP6.93□□□□□ -1.3
CD47-205ENST00000517766 BSDC1Q9NW68 430 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms