RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PRDM1O75626 825 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 CORO7P57737 925 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 WTAPQ15007 396 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 AKNAD1Q5T1N1 836 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 ATP1A1P05023 1023 aaKnown RBP13.97□□□□□ -0.17
PCM1-203ENST00000517545 CSF1RP07333 972 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 ITGA6P23229 1130 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 USP14P54578 494 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
PCM1-203ENST00000517545 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 HINFPQ9BQA5 517 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
PCM1-203ENST00000517545 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.17
PCM1-203ENST00000517545 SEMA3EO15041 775 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
PCM1-203ENST00000517545 MFSD6Q6ZSS7 791 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 MAGEB6Q8N7X4 407 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 CNNM1Q9NRU3 951 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 MYO1AQ9UBC5 1043 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.17
PCM1-203ENST00000517545 RRAGBQ5VZM2 374 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 ICE2Q659A1 982 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 FANCBQ8NB91 859 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 HELBQ8NG08 1087 aaPredicted RBP13.96□□□□□ -0.17
PCM1-203ENST00000517545 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 XDHP47989 1333 aa13.96□□□□□ -0.17
PCM1-203ENST00000517545 SNAP23O00161 211 aa13.96□□□□□ -0.18
PCM1-203ENST00000517545 NDUFA10O95299 355 aa13.96□□□□□ -0.18
PCM1-203ENST00000517545 MYBL2P10244 700 aa13.96□□□□□ -0.18
PCM1-203ENST00000517545 ZNF174Q15697 407 aa13.96□□□□□ -0.18
PCM1-203ENST00000517545 LIMA1Q9UHB6 759 aaKnown RBP13.96□□□□□ -0.18
PCM1-203ENST00000517545 EPN1Q9Y6I3 576 aaPredicted RBP13.96□□□□□ -0.18
PCM1-203ENST00000517545 GSG1L2A8MUP6 293 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCM1-203ENST00000517545 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
PCM1-203ENST00000517545 ALX1Q15699 326 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 CT47A1Q5JQC4 288 aaPredicted RBP13.95□□□□□ -0.18
PCM1-203ENST00000517545 SMIM22K7EJ46 135 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 GPTP24298 496 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 VGLL2Q8N8G2 317 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 MTRQ99707 1265 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
PCM1-203ENST00000517545 GGCXP38435 758 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
PCM1-203ENST00000517545 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
PCM1-203ENST00000517545 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 TUBBP07437 444 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 UBXN1Q04323 297 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 TCP11X2Q5H9J9 407 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 KRT23Q9C075 422 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 LRP6O75581 1613 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 NID2Q14112 1375 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 HERVK_113P62684 666 aa13.94□□□□□ -0.18
PCM1-203ENST00000517545 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
PCM1-203ENST00000517545 ZNF185O15231 689 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 TDO2P48775 406 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 STIM1Q13586 685 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 RABEP2Q9H5N1 569 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 CDHR2Q9BYE9 1310 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 PSMD14O00487 310 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
PCM1-203ENST00000517545 SART3Q15020 963 aaKnown RBP13.93□□□□□ -0.18
PCM1-203ENST00000517545 PKN1Q16512 942 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 PPM1EQ8WY54 764 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 ZNF512BQ96KM6 892 aaPredicted RBP13.93□□□□□ -0.18
PCM1-203ENST00000517545 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 EHD4Q9H223 541 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 SAR1BQ9Y6B6 198 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 ERICH2A1L162 156 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 AGPSO00116 658 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 PDE8BO95263 885 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 PAK1Q13153 545 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
PCM1-203ENST00000517545 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
PCM1-203ENST00000517545 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
PCM1-203ENST00000517545 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
PCM1-203ENST00000517545 PES1O00541 588 aaKnown RBP13.92□□□□□ -0.18
PCM1-203ENST00000517545 ARID4AP29374 1257 aaPredicted RBP13.92□□□□□ -0.18
PCM1-203ENST00000517545 CTCFLQ8NI51 663 aaPredicted RBP13.92□□□□□ -0.18
PCM1-203ENST00000517545 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
PCM1-203ENST00000517545 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
PCM1-203ENST00000517545 CCDC196A0A1B0GTZ2 297 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms