RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 FAM217BQ9NTX9 383 aaPredicted RBP25.54■■□□□ 1.68
EFCAB13-202ENST00000517310 USP17L5A8MUK1 530 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 ITGBL1O95965 494 aaPredicted RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 HSP90AA1P07900 732 aaKnown RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 FMR1Q06787 632 aaKnown RBP eCLIP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 RTN1Q16799 776 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 ARMC9Q7Z3E5 817 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 CCDC144CPQ8IYA2 1237 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 PICK1Q9NRD5 415 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 A0A1W2PRG0 241 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 DHX16O60231 1041 aaKnown RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 CDC27P30260 824 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 TTLL12Q14166 644 aaPredicted RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 GRM4Q14833 912 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 RBM28Q9NW13 759 aaKnown RBP25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 TMX2Q9Y320 296 aa25.53■■□□□ 1.68
EFCAB13-202ENST00000517310 PHIPQ8WWQ0 1821 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 CCDC196A0A1B0GTZ2 297 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 SNHG28P0DPA3 235 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 PTPRAP18433 802 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 ADD1P35611 737 aaKnown RBP25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 VGLL4Q14135 290 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 CCDC84Q86UT8 332 aaPredicted RBP25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 ANKRD13AQ8IZ07 590 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 GMCL1P1Q8NEA9 526 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 CTCFLQ8NI51 663 aaPredicted RBP25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 ACER1Q8TDN7 264 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 LLPHQ9BRT6 129 aaKnown RBP25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 SH2D4AQ9H788 454 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 SNCAIPQ9Y6H5 919 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 TRPM7Q96QT4 1865 aa25.52■■□□□ 1.68
EFCAB13-202ENST00000517310 ECE1P42892 770 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 FKBP1BP68106 108 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 MOB2Q70IA6 237 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 SPRYD3Q8NCJ5 442 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 WDR18Q9BV38 432 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 ZNF408Q9H9D4 720 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 CSADQ9Y600 493 aa25.51■■□□□ 1.67
EFCAB13-202ENST00000517310 PDHBP11177 359 aa25.5■■□□□ 1.67
EFCAB13-202ENST00000517310 KIF5BP33176 963 aa25.5■■□□□ 1.67
EFCAB13-202ENST00000517310 AS3MTQ9HBK9 375 aa25.5■■□□□ 1.67
EFCAB13-202ENST00000517310 FOXD4L1Q9NU39 408 aa25.5■■□□□ 1.67
EFCAB13-202ENST00000517310 UNCXA6NJT0 531 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 CPLX1O14810 134 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 CTDNEP1O95476 244 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 NTRK3Q16288 839 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 CPLX2Q6PUV4 134 aaKnown RBP25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 NSUN7Q8NE18 718 aaKnown RBP25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 MAD2L2Q9UI95 211 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 MTMR7Q9Y216 660 aa25.49■■□□□ 1.67
EFCAB13-202ENST00000517310 PALM3A6NDB9 673 aaPredicted RBP25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 F5H6K3 240 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 CELF2O95319 508 aaKnown RBP25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 KLRC3Q07444 240 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 LDLRAD1Q5T700 205 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 SLFN13Q68D06 897 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 SMARCC2Q8TAQ2 1214 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 DCAF4Q8WV16 495 aa25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 GBA2Q9HCG7 927 aaPredicted RBP25.48■■□□□ 1.67
EFCAB13-202ENST00000517310 CDKL5O76039 1030 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 PARP1P09874 1014 aaKnown RBP25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 GNAQP50148 359 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 TMTC3Q6ZXV5 915 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 RASGRP2Q7LDG7 609 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 VCPKMTQ9H867 229 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 GOPCQ9HD26 462 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 SMC3Q9UQE7 1217 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 NDUFB10O96000 172 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 IFNAR1P17181 557 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 YY1P25490 414 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 ASPRV1Q53RT3 343 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 USP17L2Q6R6M4 530 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 ZNF280CQ8ND82 737 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 GMCL1Q96IK5 515 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 KIAA1683Q9H0B3 1180 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 ZHX2Q9Y6X8 837 aa25.47■■□□□ 1.67
EFCAB13-202ENST00000517310 USP17L10C9JJH3 530 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 UBE2Q2LH0YL09 131 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 PLEKHA8P1O95397 391 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 ZNF543Q08ER8 600 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 STAG2Q8N3U4 1231 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 C2orf69Q8N8R5 385 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 FEZ1Q99689 392 aa25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 CWC22Q9HCG8 908 aaKnown RBP25.46■■□□□ 1.67
EFCAB13-202ENST00000517310 PTPDC1A2A3K4 754 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 JAK2O60674 1132 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 HMGN5P82970 282 aaKnown RBP25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 FUT2Q10981 343 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 GPATCH4Q5T3I0 446 aaKnown RBP25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 SMC1BQ8NDV3 1235 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 CLMNQ96JQ2 1002 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 LZTS2Q9BRK4 669 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 ELP3Q9H9T3 547 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 AFG3L2Q9Y4W6 797 aa25.45■■□□□ 1.66
EFCAB13-202ENST00000517310 PASKQ96RG2 1323 aa25.44■■□□□ 1.66
EFCAB13-202ENST00000517310 GJB2P29033 226 aa25.44■■□□□ 1.66
EFCAB13-202ENST00000517310 SLC1A4P43007 532 aa25.44■■□□□ 1.66
EFCAB13-202ENST00000517310 PPATQ06203 517 aa25.44■■□□□ 1.66
EFCAB13-202ENST00000517310 SPP2Q13103 211 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms