RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CRACR2BQ8N4Y2 399 aaPredicted RBP4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 MRGPRX3Q96LB0 322 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 FBXL18Q96ME1 805 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 APBA2Q99767 749 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 FOXQ1Q9C009 403 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 GBP3Q9H0R5 595 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 ACSS3Q9H6R3 686 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 CAAP1Q9H8G2 361 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 KLHL42Q9P2K6 505 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 AP4E1Q9UPM8 1137 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 ACTL7BQ9Y614 415 aa4.7□□□□□ -1.66
RNU6-840P-201ENST00000517275 TRBV23-1A0A0A0MS06 115 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 GNB5O14775 395 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 PDGFRBP09619 1106 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 HCLS1P14317 486 aaPredicted RBP4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 AMPD1P23109 780 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 SOX5P35711 763 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 GRB10Q13322 594 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 FOXB2Q5VYV0 432 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 HEATR6Q6AI08 1181 aaKnown RBP4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 LYPD4Q6UWN0 246 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 LINC00114Q6XXX2 140 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 CDC37L1Q7L3B6 337 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 TRIM59Q8IWR1 403 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 SCUBE1Q8IWY4 988 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 GSTCDQ8NEC7 633 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 CHAC2Q8WUX2 184 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 EZH1Q92800 747 aaPredicted RBP4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 COX4I2Q96KJ9 171 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 PSMG3-AS1Q96PY0 264 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 PICK1Q9NRD5 415 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 FAM105AQ9NUU6 356 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 MAGEC2Q9UBF1 373 aaPredicted RBP4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 APEX2Q9UBZ4 518 aa4.69□□□□□ -1.66
RNU6-840P-201ENST00000517275 F8W735 103 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 PDE8AO60658 829 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 NPTXRO95502 500 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 SCG5P05408 212 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 ITGAVP06756 1048 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 C6orf222P0C671 652 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 CD247P20963 164 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 GBP1P32455 592 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 MAP4K2Q12851 820 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 UVSSAQ2YD98 709 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 TRAPPC3LQ5T215 181 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 TDRD10Q5VZ19 366 aaKnown RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 POMZP3Q6PJE2 187 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 C7orf61Q8IZ16 206 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 ARHGEF39Q8N4T4 335 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 AFAP1L2Q8N4X5 818 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 BVESQ8NE79 360 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 BAHD1Q8TBE0 780 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 OSBP2Q969R2 916 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 DPH2Q9BQC3 489 aaPredicted RBP4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 PIDD1Q9HB75 910 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 CEP131Q9UPN4 1083 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 ATP8A1Q9Y2Q0 1164 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 EMC9Q9Y3B6 208 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 FHOD1Q9Y613 1164 aa4.68□□□□□ -1.66
RNU6-840P-201ENST00000517275 MARCH6O60337 910 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 EFCAB14O75071 495 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 PPM1BO75688 479 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 ARHGEF15O94989 841 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 ITGA4P13612 1032 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 ETV3P41162 512 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 EXOSC10Q01780 885 aaKnown RBP4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 TESK1Q15569 626 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 SV2CQ496J9 727 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 ZNF385CQ66K41 422 aaPredicted RBP4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 DCAF15Q66K64 600 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 FDX2Q6P4F2 183 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 SEZ6L2Q6UXD5 910 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 C22orf34Q6ZV56 151 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 PPM1KQ8N3J5 372 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 SYTL5Q8TDW5 730 aaPredicted RBP4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 KREMEN1Q96MU8 473 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 TRIM39Q9HCM9 518 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 GP6Q9HCN6 339 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 ENAMQ9NRM1 1142 aa4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 NOP53Q9NZM5 478 aaKnown RBP4.67□□□□□ -1.66
RNU6-840P-201ENST00000517275 FAM83GA6ND36 823 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 FAM86C2PA6NEL3 165 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 ALG1L2C9J202 215 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 S100BP04271 92 aaPredicted RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 PABPC1P11940 636 aaKnown RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 ASPAP45381 313 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CDKN1CP49918 316 aaPredicted RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 GABREP78334 506 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 AUHQ13825 339 aaKnown RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CBX2Q14781 532 aaPredicted RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 FAM209AQ5JX71 171 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 YOD1Q5VVQ6 348 aaPredicted RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 GPAT2Q6NUI2 795 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 LETMD1Q6P1Q0 360 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CCDC144CPQ8IYA2 1237 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms