RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 TKFCQ3LXA3 575 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 SGO2Q562F6 1265 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 FBLIM1Q8WUP2 373 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 RCC1LQ96I51 464 aaKnown RBP4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 MRGPRX3Q96LB0 322 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 KREMEN1Q96MU8 473 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 NACC1Q96RE7 527 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 PIDD1Q9HB75 910 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 PICK1Q9NRD5 415 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 PFDN2Q9UHV9 154 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 ZNF451Q9Y4E5 1061 aa4.49□□□□□ -1.69
RNU6-143P-201ENST00000516942 FAM86C2PA6NEL3 165 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 CLEC3AO75596 197 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 RFPL3O75679 317 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 VIL1P09327 827 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 HSP90B1P14625 803 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 NCLP19338 710 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 CD247P20963 164 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 GYS2P54840 703 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 AUHQ13825 339 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 NBPF9Q3BBW0 867 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 DALRD3Q5D0E6 543 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 TMEM67Q5HYA8 995 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 DCAF15Q66K64 600 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 LETMD1Q6P1Q0 360 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 FAM20CQ8IXL6 584 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 C7orf61Q8IZ16 206 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 LRRC47Q8N1G4 583 aaKnown RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 ARHGEF39Q8N4T4 335 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 RNF141Q8WVD5 230 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 SCARF2Q96GP6 870 aaPredicted RBP4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 APBA2Q99767 749 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 PRDM10Q9NQV6 1147 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 PRR13Q9NZ81 148 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 APEX2Q9UBZ4 518 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 PRKAB1Q9Y478 270 aa4.48□□□□□ -1.69
RNU6-143P-201ENST00000516942 IQCA1LA6NCM1 817 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 KCNQ2O43526 872 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 TP53P04637 393 aaPredicted RBP4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 ITGAVP06756 1048 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 MAP4P27816 1152 aaKnown RBP4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 MASP1P48740 699 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 USP11P51784 963 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 CYP4F3Q08477 520 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 MAP7Q14244 749 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 GPAT2Q6NUI2 795 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 C22orf34Q6ZV56 151 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 PODNQ7Z5L7 613 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 CDH24Q86UP0 819 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 TXNRD3Q86VQ6 643 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 ZSWIM2Q8NEG5 633 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 EXOC2Q96KP1 924 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 SLC26A8Q96RN1 970 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 FEZ1Q99689 392 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 DUSP23Q9BVJ7 150 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 ASPNQ9BXN1 380 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 IFT57Q9NWB7 429 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 USP21Q9UK80 565 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 EMC9Q9Y3B6 208 aa4.47□□□□□ -1.69
RNU6-143P-201ENST00000516942 PPP1R12AO14974 1030 aaPredicted RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 CLSTN1O94985 981 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 FGFR1P11362 822 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 BMP3P12645 472 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 GLB1P16278 677 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 GSK3AP49840 483 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 ZNF445P59923 1031 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 PPP2R2AP63151 447 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 TCEA2Q15560 299 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 TDRD10Q5VZ19 366 aaKnown RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 CLEC10AQ8IUN9 316 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 SCUBE1Q8IWY4 988 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 BVESQ8NE79 360 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 SYTL5Q8TDW5 730 aaPredicted RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 XAGE3Q8WTP9 111 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 OSBP2Q969R2 916 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 ZNF512BQ96KM6 892 aaPredicted RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 Q96M66 194 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 HEXIM2Q96MH2 286 aaKnown RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 FAM83CQ9BQN1 747 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 DHRS4Q9BTZ2 278 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 SSU72Q9NP77 194 aaKnown RBP4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 WHRNQ9P202 907 aa4.46□□□□□ -1.7
RNU6-143P-201ENST00000516942 FAM95CA0A1B0GW59 222 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 SART1O43290 800 aaKnown RBP4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 LRRN2O75325 713 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 LEFTY1O75610 366 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 HMGB1P09429 215 aaKnown RBP4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 NAT2P11245 290 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 SRFP11831 508 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 POU3F3P20264 500 aaPredicted RBP4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 RAB6AP20340 208 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 GRIA2P42262 883 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 RNF4P78317 190 aa4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 INSM1Q01101 510 aaPredicted RBP4.45□□□□□ -1.7
RNU6-143P-201ENST00000516942 PTPROQ16827 1216 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms