RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 CTGFP29279 349 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 PSMC4P43686 418 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 HAND2P61296 217 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 HERVK_113P62684 666 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 COG2Q14746 738 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 FBXO46Q6PJ61 603 aaPredicted RBP13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 MFSD6Q6ZSS7 791 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 STAG1Q8WVM7 1258 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 ABHD8Q96I13 439 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 TSPY2A6NKD2 308 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 F5H6K3 240 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 TTLL1O95922 423 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 HOXD10P28358 340 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 NOVP48745 357 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 PTH1RQ03431 593 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 KLRC3Q07444 240 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 Q3C1V9 767 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 LBX2Q6XYB7 198 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 RNF41Q9H4P4 317 aaPredicted RBP13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
SCARNA20-201ENST00000516768 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 FCGRTP55899 365 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 MAP4K1Q92918 833 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 TOMM22Q9NS69 142 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
SCARNA20-201ENST00000516768 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 NMT2O60551 498 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 NT5C2P49902 561 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 PRMT2P55345 433 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 TTC14Q96N46 770 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
SCARNA20-201ENST00000516768 SPDYE16A6NNV3 312 aaPredicted RBP13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 PEX10O60683 326 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 CNMDO75829 334 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 DSG3P32926 999 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 ESR2Q92731 530 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
SCARNA20-201ENST00000516768 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 RAD21O60216 631 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 FLOT1O75955 427 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 NDUFB10O96000 172 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 ERVK-9P63128 1117 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 ERVK-24P63145 666 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 MYH8P13535 1937 aa13.17□□□□□ -0.3
SCARNA20-201ENST00000516768 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 TNPO2O14787 897 aaKnown RBP13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 CYP21A2P08686 494 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 COA7Q96BR5 231 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 KRT23Q9C075 422 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 LSG1Q9H089 658 aaKnown RBP13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 GABRQQ9UN88 632 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
SCARNA20-201ENST00000516768 NEDD4P46934 1319 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 CCDC85CA6NKD9 419 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 KDM4AO75164 1064 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 MCCP23508 829 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms